DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gfat2 and gfat-1

DIOPT Version :9

Sequence 1:NP_651617.1 Gene:Gfat2 / 43373 FlyBaseID:FBgn0039580 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001369886.1 Gene:gfat-1 / 174778 WormBaseID:WBGene00008546 Length:725 Species:Caenorhabditis elegans


Alignment Length:730 Identity:436/730 - (59%)
Similarity:550/730 - (75%) Gaps:52/730 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCGIFAYLNYLTPKSRQEVLDLLLQGLKRLEYRGYDSTGIAIDALNSGEA--QSIMLVKRTGKVK 63
            |||||||||:||||.|.|::|:|:|||:|:|||||||.|||||..|..|:  .|:.|:::.|||.
 Worm     1 MCGIFAYLNFLTPKKRSEIVDILVQGLQRMEYRGYDSAGIAIDGSNEIESPHSSVALLRKAGKVS 65

  Fly    64 VLEDAVAEVCRGQDYSLPIDTHIGIAHTRWATHGVPSEVNSHPQRSDEDNSFVVVHNGIITNYKD 128
            ||.|.:.|.....|..:..:.|.|||||||||||.|.:|||||.||::.|.|:||||||||||::
 Worm    66 VLSDFIKESSSDLDMDMEYNIHCGIAHTRWATHGSPRDVNSHPHRSNDKNEFLVVHNGIITNYRE 130

  Fly   129 VKTLLEKRGYVFESDTDTEVIAKLVHHLWQQHPGYTFGELVEQAIQQLEGAFAIAFKSKHFPGEC 193
            :|..|||:|:.|||:|||||||||..|:..::|.::|.:|||..|||||||||:||||..|||:.
 Worm   131 IKEYLEKKGHKFESETDTEVIAKLAQHIHDRYPDFSFRQLVETVIQQLEGAFALAFKSSRFPGQL 195

  Fly   194 VASRRGSPLLVGIKAKTKLATDHIPILYAK-------------------AHRPHGQPQQQAYQL- 238
            ||||||||||||||:.::|.|:|.|:.::|                   .|..|.:.:....:. 
 Worm   196 VASRRGSPLLVGIKSNSRLQTNHFPVSFSKDAGWKWGDEKQTDGRRFMSNHATHLRDETSFVETP 260

  Fly   239 ------------------LPPGDCNAEFQPLERK--EVEYFFASDASAVIEHTNRVIYLEDDDVA 283
                              :...|.....:|.:..  |||||.||||:|:||||.:|::|||||||
 Worm   261 NNILDLSIAVRSSNGSAKMEISDSTTAVRPFDSDDWEVEYFVASDAAAIIEHTKQVLFLEDDDVA 325

  Fly   284 AVKSDGTLSIHRLNKSSDD-PHAREIITLKMEIQQIMKGNYDYFMLKEIFEQPESVVNTMRGRMR 347
            .|: ||.|:|||:::.:|: ...||:..|:||:|:||||::..:|.|||||||:|||||||||: 
 Worm   326 FVE-DGALTIHRISRHADNGEQKREVKLLEMELQEIMKGSFKTYMQKEIFEQPDSVVNTMRGRV- 388

  Fly   348 FDTQTVVLGGIKEYIPEIKRCRRLMLIACGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTP 412
            ..:..|||||||||:|:|||||||:::|||||||||:|.||:||||:||||:||||||||||.||
 Worm   389 LPSGQVVLGGIKEYLPDIKRCRRLIMVACGTSYHSAIACRQILEELSELPVVVELASDFLDRETP 453

  Fly   413 IFRDDVCFFISQSGETADTLMALRYCKQRGALIVGVTNTVGSSICRESHCGVHINAGPEIGVAST 477
            |||||||.||||||||||||:||||||.||||.:|||||||||||||||||:|||||||||||||
 Worm   454 IFRDDVCLFISQSGETADTLLALRYCKPRGALTIGVTNTVGSSICRESHCGIHINAGPEIGVAST 518

  Fly   478 KAYTSQFISLVMFALVMSEDRLSLQQRRLEIIDGLSQLDEHIRTVLKLNSQVQQLAKELYEHKSL 542
            ||||||.:||:||||.:|:||:|:.:||.||||.|:.|.|.||.||:|:.:|..:||::|:.|||
 Worm   519 KAYTSQILSLLMFALTLSDDRISMAKRREEIIDALNDLPELIREVLQLDEKVLDIAKQIYKEKSL 583

  Fly   543 LIMGRGFNFATCLEGALKVKELTYMHSEGILAGELKHGPLALVDKEMPVLMIVLRDPVYTKCMNA 607
            ||||||.|||||||||||:|||:|||.|||::|||||||||:||:.:.:.|:|..|.||.|.:||
 Worm   584 LIMGRGLNFATCLEGALKIKELSYMHCEGIMSGELKHGPLAMVDEFLSICMVVCNDRVYKKSLNA 648

  Fly   608 LQQVTSRKGRPILICE----EGDNETMSFSTRSLQIPRTVDCLQGVLTVIPLQLLSYHIAVLRGC 668
            ||||.:|||.||:|.:    |||...|.   ..|::|:||||:|.:||||||||||||||.|.|.
 Worm   649 LQQVVARKGAPIIIADCTVPEGDLAGMK---HILRVPKTVDCVQNILTVIPLQLLSYHIAELNGA 710

  Fly   669 DVDCPRNLAKSVTVE 683
            :||.|||||||||||
 Worm   711 NVDRPRNLAKSVTVE 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gfat2NP_651617.1 PLN02981 1..683 CDD:215531 434/728 (60%)
GFAT 2..285 CDD:238366 160/324 (49%)
SIS_GlmS_GlmD_1 370..495 CDD:240141 105/124 (85%)
SIS_GlmS_GlmD_2 528..681 CDD:240142 98/156 (63%)
gfat-1NP_001369886.1 PLN02981 1..725 CDD:215531 434/728 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 230 1.000 Domainoid score I1391
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68439
Inparanoid 1 1.050 857 1.000 Inparanoid score I218
Isobase 1 0.950 - 0 Normalized mean entropy S298
OMA 1 1.010 - - QHG60617
OrthoDB 1 1.010 - - D121801at33208
OrthoFinder 1 1.000 - - FOG0001486
OrthoInspector 1 1.000 - - mtm4763
orthoMCL 1 0.900 - - OOG6_100463
Panther 1 1.100 - - LDO PTHR10937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R488
SonicParanoid 1 1.000 - - X945
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.960

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