DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12516 and Ssadh

DIOPT Version :10

Sequence 1:NP_651615.2 Gene:CG12516 / 43370 FlyBaseID:FBgn0039577 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster


Alignment Length:216 Identity:38/216 - (17%)
Similarity:77/216 - (35%) Gaps:75/216 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 NAPCMMVIFEDGDVNCALHHLVESLQDPFALDAVAV--ILVQEALAEEIENRVKILMKPL----- 141
            |||  .::|:..|:..|:...:.|.........|:.  ..||:::.::...::|..::.|     
  Fly   281 NAP--FIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDG 343

  Fly   142 ---DARVA---NHPCYKRTLMKIDELRPK---TIIGPSDRVLPDA-----TPIMVRDIPHKFLGD 192
               |.::.   |...:.:....:::.|.|   .|:|  .:.|||.     .|.:|.|:|      
  Fly   344 QGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILG--GQPLPDKGSLFYAPTIVTDVP------ 400

  Fly   193 GPTGIITMHIFRTPFEATQIYRKEYPLPIASVSIWNERVSSVYDVIGMMNLLDTFKINCFTVDME 257
                           .:.|:|.:|...|:.|:..:.:                         :.|
  Fly   401 ---------------PSAQLYSEEVFGPVVSIIRFRD-------------------------EEE 425

  Fly   258 PIKRAFELRKYSACIHRGYHY 278
            .:|:|.:.|:..|    ||.|
  Fly   426 AVKKANDTRRGLA----GYFY 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12516NP_651615.2 DUF1487 82..298 CDD:254173 38/216 (18%)
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 38/216 (18%)

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