DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12516 and Aldh1a1

DIOPT Version :10

Sequence 1:NP_651615.2 Gene:CG12516 / 43370 FlyBaseID:FBgn0039577 Length:300 Species:Drosophila melanogaster
Sequence 2:XP_038949786.1 Gene:Aldh1a1 / 24188 RGDID:2087 Length:520 Species:Rattus norvegicus


Alignment Length:198 Identity:43/198 - (21%)
Similarity:81/198 - (40%) Gaps:38/198 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KEEEVKYAWNAPCMMVIFEDGDVNCAL---HHLVESLQDPFALDAVAVILVQEALAEE-----IE 131
            |...::....:||  ::|.|.|::.|:   ||.|...|....: |.:.|.|:|::.:|     :|
  Rat   283 KRVTLELGGKSPC--IVFADADLDIAVEFAHHGVFYHQGQCCV-AASRIFVEESVYDEFVRKSVE 344

  Fly   132 NRVK-ILMKPLDARVANHPCYKRTLMKIDELRPKTIIGPSDRVLPDATPIMVRDIPHKFLGDGPT 195
            ...| :|..||...:...|       :||:.:       .|::| |......::......|.|..
  Rat   345 RAKKYVLGNPLTQGINQGP-------QIDKEQ-------HDKIL-DLIESGKKEGAKLECGGGRW 394

  Fly   196 G----IITMHIFRTPFEATQIYRKEYPLPIASVSIWNERVSSVYDVIGMMNLLDTFKI--NCFTV 254
            |    .:...:|....:..:|.::|...|:..:.    :..|:.|||...| ..|:.:  ..||.
  Rat   395 GNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIM----KFKSIDDVIKRAN-NTTYGLAAGVFTK 454

  Fly   255 DME 257
            |::
  Rat   455 DLD 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12516NP_651615.2 DUF1487 82..298 CDD:254173 42/191 (22%)
Aldh1a1XP_038949786.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 43/198 (22%)

Return to query results.
Submit another query.