Protein Alignment trv and NAM8

DIOPT Version :10

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_011954.1
• Gene: NAM8 / 856486
• SGDID: S000001128
• Length: 523
• Species: Saccharomyces cerevisiae
• Alignment Length: 306
• Identity: 73/306 - (23%)
• Similarity: 122/306 - (39%)
• Gaps: 91/306 - (29%)

  Fly   240 AVSAYQRNGKLPRNLPALRAMEMALRTNSFATPPAPHSLPLPPPHAARTEGGGQDMEDSDEEMEY 304
            |.:|..:||.|..|.|. :.:::...|:|::.  :.:||       ...:.|
Yeast   119 AANALLKNGMLIPNFPN-KKLKLNWATSSYSN--SNNSL-------NNVKSG------------- 160

  Fly   305 MPPLHKQFHIFVGDLSSEIETQQLREAF-TPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAES 368
                 ....||||||:..:...||.|.| ..:...|..::|.|..|..|||||||.|....|.:.
Yeast   161 -----NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220

  Fly   369 AITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSS--------------------- 412
            |::.|.|.:|..|:|:..      |.|.:. :.::.:..||:||
Yeast   221 ALSEMQGVFLNGRAIKVG------PTSGQQ-QHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLS 278

  Fly   413 -------------------------------PSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQ 446
                                           |:|.||::||::|.:|   |:.|:..|.|:|.|.
Yeast   279 NGNNNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVT---EDELRAYFQPFGTIV 340

  Fly   447 EIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWGKES 492
            .:::...|...||::..:.:|..||.|:....|....|:.|||:.:
Yeast   341 YVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSA 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:409789	29/74 (39%)
		RRM3_TIA1_like	416..489	CDD:409790	22/72 (31%)
NAM8	NP_011954.1	RRM1_NGR1_NAM8_like	55..144	CDD:410023	7/25 (28%)
		RRM2_SECp43_like	162..241	CDD:409781	30/84 (36%)
		RRM3_NGR1_NAM8_like	312..383	CDD:409782	23/73 (32%)