Protein Alignment trv and NAM8

DIOPT Version :9

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_011954.1
• Gene: NAM8 / 856486
• SGDID: S000001128
• Length: 523
• Species: Saccharomyces cerevisiae
• Alignment Length: 306
• Identity: 73/306 - (23%)
• Similarity: 122/306 - (39%)
• Gaps: 91/306 - (29%)

  Fly   240 AVSAYQRNGKLPRNLPALRAMEMALRTNSFATPPAPHSLPLPPPHAARTEGGGQDMEDSDEEMEY 304
            |.:|..:||.|..|.|. :.:::...|:|::.  :.:||       ...:.|
Yeast   119 AANALLKNGMLIPNFPN-KKLKLNWATSSYSN--SNNSL-------NNVKSG------------- 160

  Fly   305 MPPLHKQFHIFVGDLSSEIETQQLREAF-TPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAES 368
                 ....||||||:..:...||.|.| ..:...|..::|.|..|..|||||||.|....|.:.
Yeast   161 -----NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220

  Fly   369 AITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSS--------------------- 412
            |::.|.|.:|..|:|:..      |.|.:. :.::.:..||:||
Yeast   221 ALSEMQGVFLNGRAIKVG------PTSGQQ-QHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLS 278

  Fly   413 -------------------------------PSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQ 446
                                           |:|.||::||::|.:|   |:.|:..|.|:|.|.
Yeast   279 NGNNNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVT---EDELRAYFQPFGTIV 340

  Fly   447 EIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWGKES 492
            .:::...|...||::..:.:|..||.|:....|....|:.|||:.:
Yeast   341 YVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSA 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	29/74 (39%)
		RRM3_TIA1_like	416..491	CDD:240800	24/74 (32%)
NAM8	NP_011954.1	RRM1_NGR1_NAM8_like	55..144	CDD:410023	7/25 (28%)
		RRM2_SECp43_like	162..241	CDD:409781	30/84 (36%)
		RRM3_NGR1_NAM8_like	312..383	CDD:409782	23/73 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910