| Sequence 1: | NP_001163754.3 | Gene: | trv / 43362 | FlyBaseID: | FBgn0085391 | Length: | 651 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_112539.2 | Gene: | Cstf2t / 83410 | MGIID: | 1932622 | Length: | 632 | Species: | Mus musculus |
| Alignment Length: | 369 | Identity: | 85/369 - (23%) |
|---|---|---|---|
| Similarity: | 123/369 - (33%) | Gaps: | 97/369 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 314 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWL 378
Fly 379 GSRSIRT-NWATRKPPASKENIKPL-----TFDEVYN-----QSSPSNCTVYVGG---------- 422
Fly 423 ------VNSALTALSEEVLQKTFAPYGAIQEIRVFK--DKGYAFVRFSTKEAATHAIVGVHNTEI 479
Fly 480 NAQPVKCSWGKESGDPNNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPTP 544
Fly 545 TYPASSATAAAVTPAAASAAAVQN--QFLQ-GIQGYHFGQYGGYQQGYMGMGVQIPATWQGVTQA 606
Fly 607 QISPAQQLATGVAGTAIPQAAGVVAYPIQ----QFQVSPQVYPL 646 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trv | NP_001163754.3 | RRM2_TIA1_like | 313..387 | CDD:240799 | 25/73 (34%) |
| RRM3_TIA1_like | 416..491 | CDD:240800 | 18/92 (20%) | ||
| Cstf2t | NP_112539.2 | RRM | <16..>109 | CDD:223796 | 32/93 (34%) |
| RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 25/73 (34%) | ||
| CSTF2_hinge | 113..191 | CDD:291025 | 12/77 (16%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 201..296 | 29/152 (19%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 365..433 | ||||
| 8 X 5 AA tandem repeats of M-E-T-R-[AG] | 428..466 | ||||
| 12 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q | 508..565 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 519..590 | ||||
| CSTF_C | 588..628 | CDD:291002 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.000 | |||||