DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment trv and trnau1apb

DIOPT Version :9

Sequence 1:	NP_001163754.3	Gene:	trv / 43362	FlyBaseID:	FBgn0085391	Length:	651	Species:	Drosophila melanogaster
Sequence 2:	NP_001025137.2	Gene:	trnau1apb / 791478	ZFINID:	ZDB-GENE-040426-2386	Length:	316	Species:	Danio rerio

Alignment Length:	333	Identity:	69/333 - (20%)
Similarity:	117/333 - (35%)	Gaps:	124/333 - (37%)

- Green bases have known domain annotations that are detailed below.

  Fly   314 IFVGDLSSEIETQQLREAFTPFGEIS-DCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQW 377
            :::|||...::...:::||:..||.: ..:::....|..|.||.||....::..:..:..:||:.
Zfish     8 LWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKL 72

  Fly   378 L-GS---RSIRTNWAT--RKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALT--ALSEEV 434
            : ||   |..:.|:||  ::|....|                  .:|:||.:.|.:.  .|.:..
Zfish    73 VPGSNPPRKFKLNYATYGKRPEPGPE------------------FSVFVGDLTSEVDDYQLHQFF 119

  Fly   435 LQK---------TFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTE-INAQPVKCSWG 489
            |:|         ...|||        ..:||.||:||.:.....|:....|.. :..:|::.|..
Zfish   120 LKKFPSCKGAKVVTDPYG--------NSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIA 176

  Fly   490 KESGDPNNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPTPTYPASSATAA 554
            ...|  |.|.|                                      :::...||..:
Zfish   177 VNKG--NKAST--------------------------------------YHNQNNTYNTN----- 196

  Fly   555 AVTPAAASAAAVQNQFLQGIQGYH-------FGQYGGYQQGY---------MG----MGV-QIPA 598
                       .|.|:.|  |.|:       :.||.||..||         ||    ||: .:|.
Zfish   197 -----------YQQQYYQ--QPYNSYYPQWGYDQYSGYNYGYNPYAAPPPMMGPPPPMGMPPMPP 248

  Fly   599 TWQGVTQA 606
            ..||.|:|
Zfish   249 DMQGSTEA 256

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	18/77 (23%)
trv	NP_001163754.3	RRM3_TIA1_like	416..491	CDD:240800	20/86 (23%)
trnau1apb	NP_001025137.2	RRM1_SECp43	7..90	CDD:241054	21/81 (26%)
		RRM2_SECp43	98..179	CDD:241056	21/106 (20%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	239..285		7/18 (39%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910