DRSC/TRiP Functional Genomics Resources

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Protein Alignment trv and Rbm31y

DIOPT Version :10

Sequence 1:NP_001163754.3 Gene:trv / 43362 FlyBaseID:FBgn0085391 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_083246.1 Gene:Rbm31y / 74484 MGIID:1921734 Length:565 Species:Mus musculus


Alignment Length:405 Identity:87/405 - (21%)
Similarity:141/405 - (34%) Gaps:127/405 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWL 378
            :|:|.||.|:..|.|.|..:.||||.|..:..||.|..|:|:|||.|...:..|..:...:.:..
Mouse    35 MFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVLFKDSATVEKVLQVKDHKVD 99

  Fly   379 GSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYG 443
            |.:            ...:..|.|       :|...|..::|||:|   ..||||.::..|..:|
Mouse   100 GKK------------IEFKRAKAL-------ESQFPNKKIFVGGLN---PRLSEEKIRAYFGTFG 142

  Fly   444 AIQ--EIRVFKD----KGYAFVRFSTKEAATHAI------VGVHNTEINAQPVKCSWGKESGDP- 495
            .|:  |:.:..|    :.:.|:::..:.:....:      :|....|     ||.::.||  :| 
Mouse   143 QIEAIELPLCSDTRERRAFGFIKYMDENSVRKVLENRYHFIGSSRCE-----VKMAYPKE--NPA 200

  Fly   496 ---NNAQTIATQALNSAAAA--------AAGFP-YGVGAAAAAAAYGQQLAATG----------- 537
               :..:.||......:..|        ..|.| :.:.|.:.|....|.....|           
Mouse   201 RQLSKRKAIAKDRTRKSVPAVELENNWRGGGSPSFHIMANSEAQEANQDAHRAGSYTSRANSDVT 265

  Fly   538 ----CWYSPTP--------TYPASSATAAAVTPAAASAA-----------AVQNQFLQGIQGYHF 579
                |.:..:|        .:..:|.|..|.:.|..|:.           |..|.||  ...|..
Mouse   266 LTNACGFRDSPNAFHVNSNVFVTNSTTFIASSNALRSSTNTVGVSHYTLDANPNTFL--ASQYTL 328

  Fly   580 G---------QY--GGYQQGYMGMGVQIPATWQGVTQAQISPAQQLATGVAGTAIPQAAGVVAYP 633
            |         ||  |.|....            ||:|..::            |.|...|:..||
Mouse   329 GTISNTLRTSQYTLGTYPNAL------------GVSQYALA------------AYPNTFGINQYP 369

  Fly   634 IQQFQVS--PQVYPL 646
            ::..|.:  ...|||
Mouse   370 LEADQNAFWTNQYPL 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trvNP_001163754.3 RRM2_TIA1_like 313..387 CDD:409789 24/72 (33%)
RRM3_TIA1_like 416..489 CDD:409790 18/84 (21%)
Rbm31yNP_083246.1 RRM_SF 34..109 CDD:473069 24/85 (28%)
RRM_SF 119..193 CDD:473069 18/81 (22%)

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