DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment trv and SRSF4

DIOPT Version :10

Sequence 1:	NP_001163754.3	Gene:	trv / 43362	FlyBaseID:	FBgn0085391	Length:	651	Species:	Drosophila melanogaster
Sequence 2:	NP_005617.2	Gene:	SRSF4 / 6429	HGNCID:	10786	Length:	494	Species:	Homo sapiens

Alignment Length:	42	Identity:	13/42 - (30%)
Similarity:	18/42 - (42%)	Gaps:	15/42 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly    97 ATVPTHPPIILPLDLSDLNSIGGKVQSVLEIHGAIDILVNNG 138
            |..|..||..|.|.:|               ||:||:.:|:|
Human   471 AFAPFCPPKRLRLVVS---------------HGSIDLDINSG 497

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:409789
trv	NP_001163754.3	RRM3_TIA1_like	416..489	CDD:409790
SRSF4	NP_005617.2	RRM1_SRSF4	1..87	CDD:410007
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	72..95
		RRM2_SRSF4_like	104..175	CDD:410012
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	169..494		11/37 (30%)
Blue background indicates that the domain is not in the aligned region.

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