Sequence 1: | NP_001163754.3 | Gene: | trv / 43362 | FlyBaseID: | FBgn0085391 | Length: | 651 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006245003.1 | Gene: | Boll / 501143 | RGDID: | 1559527 | Length: | 340 | Species: | Rattus norvegicus |
Alignment Length: | 304 | Identity: | 75/304 - (24%) |
---|---|---|---|
Similarity: | 117/304 - (38%) | Gaps: | 72/304 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 365 EAESAITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTA 429
Fly 430 LSEEVLQKTFAPYGAIQEIRVFKD-----KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWG 489
Fly 490 -----KESGDPNNAQTIATQALNSAAAAAAGFPY----GVGAAAAAAAYGQQLAATGCWYSPTPT 545
Fly 546 YPASSATAAAVTPAAASAAAVQNQFLQGIQGYHFGQYGGYQQGYMGMGVQIPATWQ-GVTQAQIS 609
Fly 610 --------PAQQLATGVAGTAIPQAAGVVAYPIQQFQVS-PQVY 644 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trv | NP_001163754.3 | RRM2_TIA1_like | 313..387 | CDD:240799 | 6/21 (29%) |
RRM3_TIA1_like | 416..491 | CDD:240800 | 22/84 (26%) | ||
Boll | XP_006245003.1 | RRM_BOULE | 43..123 | CDD:410074 | 23/86 (27%) |
PABP-1234 | <45..293 | CDD:130689 | 63/255 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |