Protein Alignment trv and hnrnpa1

DIOPT Version :10

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: XP_012812298.1
• Gene: hnrnpa1 / 496507
• XenbaseID: XB-GENE-493963
• Length: 362
• Species: Xenopus tropicalis
• Alignment Length: 308
• Identity: 74/308 - (24%)
• Similarity: 118/308 - (38%)
• Gaps: 61/308 - (19%)

  Fly   314 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWL 378
            :|:|.||.|...:.|||.|..:|.::||.|:|||.:.:|:|:|||::....|.::|::|...: :
 Frog    16 LFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSTDEVDAAMSARPHK-V 79

  Fly   379 GSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYG 443
            ..|.:....|..:..:|:.... ||..:           ::|||:..   ...|..|::.|..||
 Frog    80 DGRVVEPKRAVSREDSSRPGAH-LTVKK-----------IFVGGIKE---DTEEHHLREYFEQYG 129

  Fly   444 AIQEIRVFKD------KGYAFVRFSTKEAATHAI------VGVHNTEI----NAQPVKCSWGKES 492
            .|:.|.:..|      :|:|||.|...::....:      |..||.|:    :.|.:....|.:.
 Frog   130 KIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCEVRKALSKQEMASVSGSQR 194

  Fly   493 GDPNNAQTIATQALNSAAAAAAG--FPYGVGAAAAAAAYG----QQLAATGCWYSPTPTYPASSA 551
            |...:..........:......|  |....|.......||    ......| .|..:|.|...:.
 Frog   195 GRGGSGNFSGRGGFGNDNFGGRGGNFSSNRGGGFGNRGYGGDGYNGFGNDG-GYGGSPPYSGGNR 258

  Fly   552 TAAAVTPAAASAAAVQNQFLQGIQGYHFGQYGGY------QQGYMGMG 593
            ....                .|.|||..||.|||      ..||.|.|
 Frog   259 GYGG----------------GGGQGYGGGQGGGYGGGNGGYDGYNGGG 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:409789	25/72 (35%)
		RRM3_TIA1_like	416..489	CDD:409790	21/88 (24%)
hnrnpa1	XP_012812298.1	RRM1_hnRNPA1	12..92	CDD:410154	26/76 (34%)
		RRM_SF	105..184	CDD:473069	20/92 (22%)
		HnRNPA1	<315..>334	CDD:463312