Protein Alignment trv and hnrnpdl

DIOPT Version :10

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_001011015.1
• Gene: hnrnpdl / 496424
• XenbaseID: XB-GENE-495016
• Length: 297
• Species: Xenopus tropicalis
• Alignment Length: 291
• Identity: 70/291 - (24%)
• Similarity: 113/291 - (38%)
• Gaps: 62/291 - (21%)

  Fly   314 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWL 378
            :|:|.||.:...:.|.|..:.|||:.||.:..||.|.:|:|:|||.|      :.|:
 Frog    28 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF------KDAV-------- 78

  Fly   379 GSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYG 443
               |:.....|::.....:.|.|.....:..:..|..  |:|||::...|   ||.:::.|..:|
 Frog    79 ---SVDKVLETKEHKLDGKLIDPKRAKALKGKEPPKK--VFVGGLSPETT---EEQIKQYFGGFG 135

  Fly   444 AIQEIRVFKD------KGYAFVRFSTKEAATHAI------VGVHNTEIN-AQPVKCSWGKESGDP 495
            .|:.|.:..|      :|:.||.::.:|.....:      :|....||. |||.:....::....
 Frog   136 EIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKVAQPKEVYRQQQQKQQ 200

  Fly   496 NNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPTPTYPASSATAAAVTPAA 560
            ...:..||     ....|.|...|.|.....:.|..|...:   |....:|
 Frog   201 KGGRGAAT-----GRGGARGRGRGQGWNQGYSNYYDQNYGS---YGNNGSY-------------- 243

  Fly   561 ASAAAVQNQFLQG--IQGYHFGQYGGYQQGY 589
              |....|....|  ..||::|.| ||.|||
 Frog   244 --ADQGYNNSYSGYDYSGYNYGSY-GYNQGY 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:409789	22/72 (31%)
		RRM3_TIA1_like	416..489	CDD:409790	22/85 (26%)
hnrnpdl	NP_001011015.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..21
		RRM1_hnRPDL	27..102	CDD:410152	25/90 (28%)
		RRM2_hnRPDL	112..186	CDD:409998	19/78 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	192..224		6/36 (17%)
		Trnau1ap	223..>272	CDD:465438	16/69 (23%)