Protein Alignment trv and snrnp70

DIOPT Version :10

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_001268699.1
• Gene: snrnp70 / 493488
• XenbaseID: XB-GENE-992818
• Length: 471
• Species: Xenopus tropicalis
• Alignment Length: 234
• Identity: 48/234 - (20%)
• Similarity: 80/234 - (34%)
• Gaps: 73/234 - (31%)

  Fly   183 PPPMLTHFQAMMQPPPLPPSPMMPPQSFGCPLPSRTPATPPLPGTYRVQSLKSAAAAAVSAYQRN 247
            ||.:|..|      .|..|.|.:||..   .||.......|..|              ::.|.|.
 Frog     6 PPNLLALF------APRDPVPYLPPLD---KLPHEKHHNQPYCG--------------IAPYIRE 47

  Fly   248 GKLPRNLPALRAMEMALRTNSFATPPAPHSLPLPPPHA---------ARTEGGGQDMEDSDEEME 303
            .:.||:.|                         ||..|         .|.|...:..:|.:.|::
 Frog    48 FEDPRDAP-------------------------PPTRAETREERMERKRREKIERRQQDVENELK 87

  Fly   304 YMPPLHKQ------FH-IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFI 361
            ...|.:.|      |. :||..::.:....:||..|..:|.|....:|.:.::.|.:||.|:.:.
 Frog    88 IWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYE 152

  Fly   362 KKSEAESAITAMNGQWLGSRSI-------RT--NWATRK 391
            .:.:..||....:|:.:..|.:       ||  .|..|:
 Frog   153 HERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRR 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:409789	18/83 (22%)
		RRM3_TIA1_like	416..489	CDD:409790
snrnp70	NP_001268699.1	U1snRNP70_N	3..94	CDD:432406	26/135 (19%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	48..78		8/54 (15%)
		Required for interaction with U1 RNA. /evidence=ECO:0000250|UniProtKB:P08621	92..202		22/100 (22%)
		RRM_snRNP70	102..187	CDD:409682	19/84 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	187..471		2/5 (40%)