DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment trv and tra2a

DIOPT Version :9

Sequence 1:	NP_001163754.3	Gene:	trv / 43362	FlyBaseID:	FBgn0085391	Length:	651	Species:	Drosophila melanogaster
Sequence 2:	XP_012819962.1	Gene:	tra2a / 448073	XenbaseID:	XB-GENE-492325	Length:	341	Species:	Xenopus tropicalis

Alignment Length:	197	Identity:	46/197 - (23%)
Similarity:	78/197 - (39%)	Gaps:	33/197 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   216 SRTPATPPLPGTYRVQS-LKSAAAAAVSAYQRNGKLPRNLPALRAME--------MALRTNSFAT 271
            ||:.:..|.....||:| .:|.:.:|..|.:|:....|:....|:..        ...|:.|.:.
Frog     9 SRSRSKSPAESAPRVKSESRSRSRSASRASKRSESRSRSRSKSRSRSRRHSHRRYSRSRSRSHSR 73

  Fly   272 PPAPHSLPLPPPHAARTEGGGQDMEDSDEEMEYMPPLHKQFH------------IFVGDLSSEIE 324
            .....|....|.:..|            ....:.|..:::.|            |.|..||....
Frog    74 KRRSKSRSYTPEYRRR------------RSRSHSPMSNRRRHNGSRANPDPNICIGVFGLSLYTT 126

  Fly   325 TQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIRTNWAT 389
            .:.|||.|:.:|.:|...||.|.:|.:|:|:.||.|.:..::..|:...||..|..|.||.:::.
Frog   127 ERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGMELDGRRIRVDYSI 191

  Fly   390 RK 391
            .|
Frog   192 TK 193

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	27/85 (32%)
trv	NP_001163754.3	RRM3_TIA1_like	416..491	CDD:240800
tra2a	XP_012819962.1	RRM	<98..>190	CDD:223796	27/91 (30%)
tra2a	XP_012819962.1	RRM_TRA2	115..192	CDD:240809	26/76 (34%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910