Sequence 1: | NP_001163754.3 | Gene: | trv / 43362 | FlyBaseID: | FBgn0085391 | Length: | 651 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524543.1 | Gene: | Hrb98DE / 43385 | FlyBaseID: | FBgn0001215 | Length: | 365 | Species: | Drosophila melanogaster |
Alignment Length: | 368 | Identity: | 70/368 - (19%) |
---|---|---|---|
Similarity: | 117/368 - (31%) | Gaps: | 144/368 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 296 EDSDEEMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSF 360
Fly 361 IKKSEAESAITAMNGQWLGSRSIRTNWATRKPPAS--KENIKPLTFDEVYNQSSPSNCTV---YV 420
Fly 421 GGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDK------GYAFVRFSTKEAATHAIVGVHNTEI 479
Fly 480 NAQPVKC--------------------------------------------------SWGKESGD 494
Fly 495 PNNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPTPTYPASSATAAAVTPA 559
Fly 560 AASAAAVQNQFLQGIQGYHFG-----------QYGGYQQGYMG 591 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trv | NP_001163754.3 | RRM2_TIA1_like | 313..387 | CDD:240799 | 20/73 (27%) |
RRM3_TIA1_like | 416..491 | CDD:240800 | 20/133 (15%) | ||
Hrb98DE | NP_524543.1 | RRM1_hnRNPA_like | 32..109 | CDD:241022 | 22/90 (24%) |
RRM_SF | 123..195 | CDD:302621 | 16/75 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |