Protein Alignment trv and Rb97D

DIOPT Version :9

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Alignment Length: 413
• Identity: 86/413 - (20%)
• Similarity: 133/413 - (32%)
• Gaps: 130/413 - (31%)

  Fly   294 DMEDSDE-EMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGF 357
            |.|:.|. |:|::..|      |:|.|:.....:.|:..:..:|::.|..|:||..|.:|:|:||
  Fly    19 DREEDDICELEHLRKL------FIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGF 77

  Fly   358 VSFIKKSEAESAITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTV---Y 419
            :::.|....:.| .......:..:::....|..:|.               .:|..:|.:|   :
  Fly    78 ITYTKSLMVDRA-QENRPHIIDGKTVEAKRALPRPE---------------RESRETNISVKKLF 126

  Fly   420 VGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDK------GYAFVRFSTKEAA-------THAI 471
            |||:..   ...||.|::.|..:|.:..:::..||      |:|||.|...:|.       .|||
  Fly   127 VGGLKD---NHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAI 188

  Fly   472 VGVHNTEINAQPVKCSW----GKESGDPNNAQTIATQALNSAAAAAAG-------------FPYG 519
            ..||      ..||.|.    .||...|.........:||.......|             |...
  Fly   189 KYVH------VDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPP 247

  Fly   520 VGAAAAAAAYGQQ-----LAAT----GCWYSPTPT------------------YPASSATAAAVT 557
            |....|...|.||     ::|.    ..|..|.|.                  ||..........
  Fly   248 VPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAP 312

  Fly   558 PAAASAAAVQNQFLQGIQGYHFGQYG---GYQQ-----------GYMGMGVQIPATW-------- 600
            |...          .|.|.:|..|:|   ..||           |:.|.....|..|
  Fly   313 PPPP----------PGAQQWHANQWGCPPPVQQVPPVGAVPPPMGHNGPPPTAPGNWNMPPPVPG 367

  Fly   601 ------QGVTQAQISPAQQLATG 617
                  |..:..|.:|.....||
  Fly   368 AAPPSHQQQSSQQPTPQPNFGTG 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	16/73 (22%)
		RRM3_TIA1_like	416..491	CDD:240800	25/94 (27%)
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	18/83 (22%)
		RRM2_hnRNPA_like	124..196	CDD:240774	21/80 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910