Sequence 1: | NP_001163754.3 | Gene: | trv / 43362 | FlyBaseID: | FBgn0085391 | Length: | 651 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476935.1 | Gene: | Rbp4 / 41668 | FlyBaseID: | FBgn0010258 | Length: | 428 | Species: | Drosophila melanogaster |
Alignment Length: | 420 | Identity: | 77/420 - (18%) |
---|---|---|---|
Similarity: | 134/420 - (31%) | Gaps: | 145/420 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 314 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWL 378
Fly 379 GSRSIRTNWATRKPPASKENIKPLTFDEVYNQSS---PSNCTVYVGGVNSALTAL---------- 430
Fly 431 -----------SEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTE 478
Fly 479 INAQPVKCSWGKESGDPNNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPT 543
Fly 544 PTY---------PASSAT----------AAAVTPAAASAAAVQNQFL--QGIQGYHFGQYGGYQQ 587
Fly 588 GYMGMGVQIPATWQGVTQAQISP------AQ--------------QLAT---------------- 616
Fly 617 -------GVAGTAIPQAAGVVAYPIQQFQV 639 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trv | NP_001163754.3 | RRM2_TIA1_like | 313..387 | CDD:240799 | 21/72 (29%) |
RRM3_TIA1_like | 416..491 | CDD:240800 | 15/101 (15%) | ||
Rbp4 | NP_476935.1 | RRM_SF | 33..110 | CDD:302621 | 24/102 (24%) |
RRM2_hnRNPA_like | 137..209 | CDD:240774 | 13/91 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |