Protein Alignment trv and tia1

DIOPT Version :9

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: XP_012814227.2
• Gene: tia1 / 394890
• XenbaseID: XB-GENE-1002876
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 416
• Identity: 168/416 - (40%)
• Similarity: 209/416 - (50%)
• Gaps: 102/416 - (24%)

  Fly   237 AAAAVSAYQRNGKLPRNLPALRAMEMALRTNSFATPPAPHSLPLPPPHAARTEGGGQDMEDSDEE 301
            |||:::|  .||:        :.|...::.| :||.|:...               :|...|
 Frog    59 AAASLAA--MNGR--------KIMGKEVKVN-WATTPSSQK---------------KDANSS--- 94

  Fly   302 MEYMPPLHKQ--FHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKS 364
             ..:..|..|  ||:||||||.||.|..::.||.|||.|||.|||:|..|.||||||||||..|.
 Frog    95 -SVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKW 158

  Fly   365 EAESAITAMNGQWLGSRSIRTNWATRKPPASK----ENIKPLTFDEVYNQSSPSNCTVYVGGVNS 425
            :||:||..|.|||||.|.||||||||||||.|    .|.|.||::||.|||||||||||.|||.|
 Frog   159 DAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTS 223

  Fly   426 ALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWGK 490
            .||   |:::::||:|:|.|.|:|||.||||:|||||:.|:|.||||.|:.|.|....|||.|||
 Frog   224 GLT---EQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285

  Fly   491 ESGDPNNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPTPTYPASSATAAA 555
            |:.|..|    ..|.::.|:..:...|||        .:||       ||
 Frog   286 ETPDMLN----PVQQVSEASQISFPPPYG--------QWGQ-------WY--------------- 316

  Fly   556 VTPAAASAAAVQNQFLQGIQGYHFGQYGGY-----QQGYMGMGVQIP---ATWQGVTQ-AQISPA 611
                  ..|....|::.  .|:....||.|     ||||.    |.|   |||.|... .|..|.
 Frog   317 ------GGAQQIGQYVP--NGWQMPAYGVYGQAWSQQGYS----QTPSSAATWVGPNYGVQPQPG 369

  Fly   612 QQLATGVAGTAIPQAAG--VVAYPIQ 635
            |.      ||.|....|  :..|..|
 Frog   370 QN------GTLITNQTGYRMAGYQTQ 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	48/73 (66%)
		RRM3_TIA1_like	416..491	CDD:240800	43/74 (58%)
tia1	XP_012814227.2	RRM1_TIA1	8..81	CDD:410027	8/32 (25%)
		RRM2_TIA1	104..181	CDD:410030	49/76 (64%)
		RRM3_TIAR	214..286	CDD:241064	43/74 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	98	1.000	Domainoid score	I7041
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1066369at2759
OrthoFinder	1	1.000	-	-		FOG0000924
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X831
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	7.020