Protein Alignment trv and hnrnpa0a

DIOPT Version :10

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_997810.2
• Gene: hnrnpa0a / 323529
• ZFINID: ZDB-GENE-030131-2249
• Length: 305
• Species: Danio rerio
• Alignment Length: 294
• Identity: 70/294 - (23%)
• Similarity: 113/294 - (38%)
• Gaps: 78/294 - (26%)

  Fly   314 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITA----MN 374
            :|||.|:.:.....||..|..:|:::||.||::.|..:|:.:|||::....||:||::|    ::
Zfish    12 LFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADSAMSARPHILD 76

  Fly   375 GQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEEVLQKTF 439
            |         .|...::..|.::..||....:|..        :::||:..   .:.|:.|:..|
Zfish    77 G---------NNVELKRAVAREDAGKPEALAKVKK--------IFIGGLKD---DIEEDHLRDCF 121

  Fly   440 APYGAIQEIRVFKDK------GYAFVRFSTKEAATHA------IVGVHNTEINAQPVKCSWGKES 492
            :.:||:::..|..||      |:.||.|...::|..|      |:..|..|     ||.:..|:.
Zfish   122 SQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHIINGHKVE-----VKKALTKQE 181

  Fly   493 GDPNNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPTPTYPASSATAAAVT 557
                      .||..|......|...|.|.......||.:....|       .|....
Zfish   182 ----------MQAAGSRGGGRGGRGGGRGMGRPQNGYGGRGGGYG-------NYGGGG------- 222

  Fly   558 PAAASAAAVQNQFLQGIQGYHFGQYGGYQQGYMG 591
                         ..|..||..|..|||..||.|
Zfish   223 -------------YGGNDGYGGGYGGGYGGGYGG 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:409789	23/76 (30%)
		RRM3_TIA1_like	416..489	CDD:409790	21/84 (25%)
hnrnpa0a	NP_997810.2	RRM1_hnRNPA0	8..86	CDD:409764	24/82 (29%)
		RRM_SF	102..181	CDD:473069	22/94 (23%)
		HnRNPA1	260..286	CDD:463312