Protein Alignment trv and cxr1

DIOPT Version :10

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_596601.2
• Gene: cxr1 / 2540551
• PomBaseID: SPBC23E6.01C
• Length: 473
• Species: Schizosaccharomyces pombe
• Alignment Length: 316
• Identity: 90/316 - (28%)
• Similarity: 135/316 - (42%)
• Gaps: 69/316 - (21%)

  Fly   269 FATPPAPHSL------PLP-PPHAAR---TEGGGQDMEDSDEEMEYMPPLHKQFHIFVGDLSSEI 323
            ||:|....|.      |:| ..|..:   ..|||...:...:..||        .|||||||..:
pombe   141 FASPHEASSAMSMNNKPIPGTNHLFKLNWASGGGLREKSISKASEY--------SIFVGDLSPNV 197

  Fly   324 ETQQLREAF-TPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIRTNW 387
            ....:...| :.:......:::.||||..|:|||||.|..:::.:||:..|.||..|.|.||...
pombe   198 NEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGL 262

  Fly   388 ATRKPPA---SKENIKPLTFDEV--YNQSSP-------SNCTVYVGGVNSALTALSEEVLQKTFA 440
            ||.|..|   |..|:.|::...|  |:.:.|       :|.||:|||::.   .:|||.|:..|.
pombe   263 ATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSK---FVSEEELKYLFQ 324

  Fly   441 PYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWGKESGDPNNAQTIATQA 505
            .:|.|..:::...||..||:|..:::|..||..:....:....::.|||:      |...||..|
pombe   325 NFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGR------NQNPIAAPA 383

  Fly   506 LNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPTPTYPASSATAAAVTPAAA 561
            ||                     |..|::.|        |.||:|...|...|..|
pombe   384 LN---------------------YQSQVSQT--------TIPATSLFPAMSLPPQA 410

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:409789	28/74 (38%)
		RRM3_TIA1_like	416..489	CDD:409790	21/72 (29%)
cxr1	NP_596601.2	RRM1_NGR1_NAM8_like	94..173	CDD:410023	7/31 (23%)
		RRM2_NGR1_NAM8_like	185..264	CDD:410025	30/86 (35%)
		RRM3_NGR1_NAM8_like	302..373	CDD:409782	22/73 (30%)