DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment trv and SPBC23E6.01c

DIOPT Version :9

Sequence 1:	NP_001163754.3	Gene:	trv / 43362	FlyBaseID:	FBgn0085391	Length:	651	Species:	Drosophila melanogaster
Sequence 2:	NP_596601.2	Gene:	SPBC23E6.01c / 2540551	PomBaseID:	SPBC23E6.01c	Length:	473	Species:	Schizosaccharomyces pombe

Alignment Length:	316	Identity:	90/316 - (28%)
Similarity:	135/316 - (42%)	Gaps:	69/316 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   269 FATPPAPHSL------PLP-PPHAAR---TEGGGQDMEDSDEEMEYMPPLHKQFHIFVGDLSSEI 323
            ||:|....|.      |:| ..|..:   ..|||...:...:..||        .|||||||..:
pombe   141 FASPHEASSAMSMNNKPIPGTNHLFKLNWASGGGLREKSISKASEY--------SIFVGDLSPNV 197

  Fly   324 ETQQLREAF-TPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIRTNW 387
            ....:...| :.:......:::.||||..|:|||||.|..:::.:||:..|.||..|.|.||...
pombe   198 NEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGL 262

  Fly   388 ATRKPPA---SKENIKPLTFDEV--YNQSSP-------SNCTVYVGGVNSALTALSEEVLQKTFA 440
            ||.|..|   |..|:.|::...|  |:.:.|       :|.||:|||::.   .:|||.|:..|.
pombe   263 ATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSK---FVSEEELKYLFQ 324

  Fly   441 PYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWGKESGDPNNAQTIATQA 505
            .:|.|..:::...||..||:|..:::|..||..:....:....::.|||:      |...||..|
pombe   325 NFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGR------NQNPIAAPA 383

  Fly   506 LNSAAAAAAGFPYGVGAAAAAAAYGQQLAATGCWYSPTPTYPASSATAAAVTPAAA 561
            ||                     |..|::.|        |.||:|...|...|..|
pombe   384 LN---------------------YQSQVSQT--------TIPATSLFPAMSLPPQA 410

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	28/74 (38%)
trv	NP_001163754.3	RRM3_TIA1_like	416..491	CDD:240800	23/74 (31%)
SPBC23E6.01c	NP_596601.2	RRM	70..376	CDD:223796	74/251 (29%)
		RRM1_NGR1_NAM8_like	94..173	CDD:241055	7/31 (23%)
		RRM2_NGR1_NAM8_like	185..264	CDD:241057	30/86 (35%)
		RRM3_NGR1_NAM8_like	302..373	CDD:240792	22/73 (30%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	112	1.000	Inparanoid score	I1562
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.960