Sequence 1: | NP_001163754.3 | Gene: | trv / 43362 | FlyBaseID: | FBgn0085391 | Length: | 651 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001317178.1 | Gene: | HNRNPA3 / 220988 | HGNCID: | 24941 | Length: | 378 | Species: | Homo sapiens |
Alignment Length: | 401 | Identity: | 99/401 - (24%) |
---|---|---|---|
Similarity: | 154/401 - (38%) | Gaps: | 95/401 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 281 PPPHAARTEGG------GQDMEDSDEEMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEIS 339
Fly 340 DCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIRTNWATRKPPASKENIKP--- 401
Fly 402 LTFDEVYNQSSPSNCTVYVGGVNSALTALSEEV-LQKTFAPYGAIQEIRVFKD------KGYAFV 459
Fly 460 RFSTKEAAT-------HAIVGVHNTEI----NAQPVKCSWGKESGDPNNAQTIATQALNSAAAA- 512
Fly 513 ----AAGF----PYGVGAAAAAAAYG------QQLAATGCWYSPTPTYPASSATAAAVTPAAASA 563
Fly 564 AAVQNQFLQGIQGYHF---GQYGGYQQG-------YMGMG-VQIPATWQGVTQAQISPAQQLATG 617
Fly 618 VAGTAIPQAAG 628 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trv | NP_001163754.3 | RRM2_TIA1_like | 313..387 | CDD:240799 | 27/73 (37%) |
RRM3_TIA1_like | 416..491 | CDD:240800 | 27/92 (29%) | ||
HNRNPA3 | NP_001317178.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..35 | 7/33 (21%) | |
RRM1_hnRNPA_like | 36..113 | CDD:409992 | 29/80 (36%) | ||
RRM2_hnRNPA3 | 126..205 | CDD:409996 | 24/94 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 204..225 | 4/21 (19%) | |||
HnRNPA1 | 331..>347 | CDD:402981 | 3/15 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 336..378 | 6/28 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |