Protein Alignment trv and rnp-9

DIOPT Version :9

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_001359585.1
• Gene: rnp-9 / 182350
• WormBaseID: WBGene00007396
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 312
• Identity: 118/312 - (37%)
• Similarity: 164/312 - (52%)
• Gaps: 62/312 - (19%)

  Fly   214 LPSRTPATP-------PLPGTY-----------RVQSLKSAAAAAVSAYQRNGKLPRNLPALRAM 260
            ||:.||.|.       |:...|           .:|||.:......:|         :||:|..:
 Worm     3 LPTATPQTSLLYSQQMPMKNLYSQFPAGLLDTQSIQSLDTCPLLLQTA---------SLPSLSHI 58

  Fly   261 EMALRTNSFATPPAPHSLPLPPPHAARTEGGGQDMEDSDEEMEYMPPLHKQFHIFVGDLSSEIET 325
            .:            ||||.....|:|           |:..||......|.||:||||||.::..
 Worm    59 GL------------PHSLESAVLHSA-----------SEPPMEMRIDTSKHFHVFVGDLSKDVSN 100

  Fly   326 QQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIRTNWATR 390
            :.|:..||.|||:|:.:|:||.||.||||||||||..|..||:||..|||:|:|.|::|||||.|
 Worm   101 ELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAAR 165

  Fly   391 KPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKG 455
            |  .|:||...|||::|:|.:...|.:||||.::...|   :..|:..|:.||.|.|:|:||.:.
 Worm   166 K--NSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTT---DADLRDLFSTYGDIAEVRIFKTQR 225

  Fly   456 YAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWGKESGDPNNAQTIATQALN 507
            |||||:..||.||.||:.::..|:....|:||||:....||       ||||
 Worm   226 YAFVRYEKKECATKAIMEMNGKEMAGNQVRCSWGRTQAVPN-------QALN 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	42/73 (58%)
		RRM3_TIA1_like	416..491	CDD:240800	31/74 (42%)
rnp-9	NP_001359585.1	RRM2_TIA1_like	88..162	CDD:240799	42/73 (58%)
		RRM3_TIA1_like	189..260	CDD:240800	30/73 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	59	1.000	Domainoid score	I7055
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1066369at2759
OrthoFinder	1	1.000	-	-		FOG0000924
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920