Protein Alignment trv and hrpa-2

DIOPT Version :9

• Sequence 1: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Sequence 2: NP_741783.1
• Gene: hrpa-2 / 180791
• WormBaseID: WBGene00019249
• Length: 336
• Species: Caenorhabditis elegans
• Alignment Length: 289
• Identity: 74/289 - (25%)
• Similarity: 115/289 - (39%)
• Gaps: 67/289 - (23%)

  Fly   193 MMQPPPLPPSPMMPPQSFGCPLPSRTPATPPLPGTYRVQSLKSAAAAAVSAYQRNGKLPRNLPAL 257
            |..|.|.||......||.|.|........||.|                   |.||     .|.:
 Worm     1 MYGPYPYPPEVAEMIQSGGFPFAMMNRGMPPPP-------------------QWNG-----YPVI 41

  Fly   258 RAMEMALRTNSFATPPAPHSLPLPPPHAARTEGGGQDMEDSDEEMEYMPPLHKQFHIFVGDLSSE 322
            ...|:......|                 :..|.||...||.      |.|.|   :|:|.||.:
 Worm    42 HPYELHQMLRQF-----------------QQMGMGQYQHDSP------PQLRK---LFIGGLSHD 80

  Fly   323 IETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQ--WLGSRSIRT 385
            ...:||...|:.:|.:.|..|:|||.|..|:|:|||:|.....|||   |||.:  .||.:::.:
 Worm    81 TTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAES---AMNDRPHKLGGKTVDS 142

  Fly   386 NWATRKPPASKENIKPLTFDEVYNQSSPS-NCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIR 449
            ..|.  |.....::.|..|.|    :.|: .|.:.:.|:.:.:.  |.:.|:..|..:|.:.::.
 Worm   143 KRAI--PREQMSSMIPPPFFE----TDPAPGCKLLLNGITNGVH--SVDSLRVYFETFGTLDQVE 199

  Fly   450 VF-KDKGYAFVRFSTKEAATHAIVGVHNT 477
            :. :.:|..||.:..||:|...:  .||:
 Worm   200 ILGQPRGLGFVIYEDKESADRCL--AHNS 226

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	28/75 (37%)
		RRM3_TIA1_like	416..491	CDD:240800	14/63 (22%)
hrpa-2	NP_741783.1	RRM	<62..230	CDD:223796	53/187 (28%)
		RRM1_hnRNPA_like	71..148	CDD:241022	30/84 (36%)
		RRM_SF	183..240	CDD:302621	11/46 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910