DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4815 and psh

DIOPT Version :10

Sequence 1:NP_651607.1 Gene:CG4815 / 43360 FlyBaseID:FBgn0039568 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:250 Identity:64/250 - (25%)
Similarity:102/250 - (40%) Gaps:45/250 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LGGVGIQLFNGRKLVCSATLLTPRHILTAAHCFE-NLNRSKFHVIGGKSAEFTWHGNNFNKNKLI 109
            :..:|...| |....|..:|:..|.:||||||.. :.|...|..:|..:.|...|.   .::.:|
  Fly   158 MAAIGYITF-GTDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIENPDHS---YQDIVI 218

  Fly   110 R-VQIHPKYAKMKFIADVAVAKTKYPLRSKYIGYAQLCRSVLH-------PRDKLIAAGWGFEGG 166
            | |:|||:|...|: .|:|:.:    |....:....:..:.||       ...|...||||.. .
  Fly   219 RSVKIHPQYVGNKY-NDIAILE----LERDVVETDNIRPACLHTDATDPPSNSKFFVAGWGVL-N 277

  Fly   167 VWDESRKKTFRSMKVGIVSKRDCE----------KQLDRKMPPNIICAGAYNNKTL---CFGDSG 218
            |...:|.|......:.:|....|.          :.|.:.:..:::|  |.:.|.:   |.||||
  Fly   278 VTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLC--AIDQKLIADACKGDSG 340

  Fly   219 GPLLLGRQV-------CGINTWTFKCGNNEKPDVYMGVRYYAKFIKRTI---NRM 263
            |||:....|       .|:.:..|.|. ...|.:|..|..|..||:..:   ||:
  Fly   341 GPLIHELNVEDGMYTIMGVISSGFGCA-TVTPGLYTRVSSYLDFIEGIVWPDNRV 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4815NP_651607.1 Tryp_SPc 49..259 CDD:473915 62/238 (26%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 62/241 (26%)
Blue background indicates that the domain is not in the aligned region.

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