DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and TUB1

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_013625.1 Gene:TUB1 / 854889 SGDID:S000004550 Length:447 Species:Saccharomyces cerevisiae


Alignment Length:452 Identity:188/452 - (41%)
Similarity:277/452 - (61%) Gaps:21/452 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQ-----HERIDVYYNEASSGKYV 60
            |||::.:..||.|.|||:..||:.|.||||.|:|  |.|..|.     .|....:::|...||:|
Yeast     1 MREVISINVGQAGCQIGNACWELYSLEHGIKPDG--HLEDGLSKPKGGEEGFSTFFHETGYGKFV 63

  Fly    61 PRAVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESE 125
            |||:.:||||..:|.||..|...||.|:..:.|:..|.||:|:||||.|.|::..||:.:||.::
Yeast    64 PRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVLDRIRKLAD 128

  Fly   126 GCDCLQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIH 190
            .||.||||...||||||||||||:||:.::..||..:....|:|.|:|:||.:||||||..|:.|
Yeast   129 QCDGLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTH 193

  Fly   191 QLVENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAV 255
            ..:|:.|.||.:||||:||:|.|.|.:..|::.:||:|::..:|.||..|||.|.||.||.:...
Yeast   194 TTLEHADCTFMVDNEAIYDMCKRNLDIPRPSFANLNNLIAQVVSSVTASLRFDGSLNVDLNEFQT 258

  Fly   256 NMVPFPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGP 320
            |:||:||:||.:..::|:.:|....:.:.:|:|:|...|:..|.|..||||.|:|:....::||.
Yeast   259 NLVPYPRIHFPLVSYSPVLSKSKAFHESNSVSEITNACFEPGNQMVKCDPRDGKYMATCLLYRGD 323

  Fly   321 MSMKEVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMS--AT------FIGNSTAIQEI 377
            :..::|...:..|::|.:...|:|.|...|:.:|..||.....|  ||      .:.|:|:|.|.
Yeast   324 VVTRDVQRAVEQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLATVDRAVCMLSNTTSIAEA 388

  Fly   378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAD---DEVEF 436
            :|||..:|..|:.::||:|||.||||:|.|||||.   .||.:..:.|.|..||   :|.||
Yeast   389 WKRIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALERDYIEVGADSYAEEEEF 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 188/452 (42%)
beta_tubulin 2..426 CDD:276956 180/436 (41%)
TUB1NP_013625.1 alpha_tubulin 2..436 CDD:276955 181/438 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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