DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and TUB4

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_013313.1 Gene:TUB4 / 850909 SGDID:S000004202 Length:473 Species:Saccharomyces cerevisiae


Alignment Length:462 Identity:133/462 - (28%)
Similarity:222/462 - (48%) Gaps:36/462 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYH--GESALQHERIDVYYNEASSGKYVPRAVL 65
            ||:.||||||||.:|...|..::.||.|..:|...  ..|..:.:....::.|.|..|:.|||::
Yeast     4 EIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSSTERDDDTKPFFRENSRNKFTPRAIM 68

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSG--AGNNWAKGHYTEGAELIDSVLEVLRKESEGCD 128
            :|.||..:..|..:..| .|.|.|......|  |||:||.| |..|....|.:|..:.||.:..|
Yeast    69 MDSEPSVIADVENTFRG-FFDPRNTWVASDGASAGNSWANG-YDIGTRNQDDILNKIDKEIDSTD 131

  Fly   129 CLQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLV 193
            ..:||||.||:.||||||||:.|:..:.:.||.:|:.::||.|: :.|:.||:.||..|::.:|:
Yeast   132 NFEGFQLLHSVAGGTGSGLGSNLLEALCDRYPKKILTTYSVFPA-RSSEVVVQSYNTILALRRLI 195

  Fly   194 ENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMV 258
            |::|.|...||.:|.:|..:..:..:......|.|:|..:|.||..:|||..:.:.:..:...::
Yeast   196 EDSDATVVFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFPSYMYSSMSSIYSTLI 260

  Fly   259 PFPRLHFFMPGFAPLTA---------KGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVA 314
            |.|.|||..|.|.|.|:         ||...|      ::...:.|..|.:.:....:..|..|.
Yeast   261 PSPELHFLSPSFTPFTSDYIHDDIAHKGHSSY------DVMLDLLDPSNSLVSTAMNNPTYFNVY 319

  Fly   315 CIFRGPMSMKEVDTQMYNVQSKNSSYFVEWIPNNVKVAV------CDIPPRGLKMSATFIGNSTA 373
            ....|.:..:::...|..:|.:..  |..|..:.:.|.:      ..:.|...::|...:.|.:.
Yeast   320 NTIIGNVEPRQISRAMTKLQQRIK--FPSWSSSAMHVNIGRRSPYLPLQPNENEVSGMMLSNMST 382

  Fly   374 IQEIFKRISEQFTAMFRRKAFLHWY-TGEGMDEM-----EFTEAESNMNDLISEYQQYQEATADD 432
            :..:|:.....|..:|.:.|||:.| .|:....|     ||.|:...:..|:.:|...::.:..|
Yeast   383 VVNVFENACNTFDKVFAKGAFLNNYNVGDLFQSMQNVQDEFAESREVVQSLMEDYVAAEQDSYLD 447

  Fly   433 EVEFDDE 439
            :|..|||
Yeast   448 DVLVDDE 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 133/462 (29%)
beta_tubulin 2..426 CDD:276956 128/447 (29%)
TUB4NP_013313.1 COG5023 2..456 CDD:227356 133/462 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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