DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and TUBA1C

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001290043.1 Gene:TUBA1C / 84790 HGNCID:20768 Length:519 Species:Homo sapiens


Alignment Length:456 Identity:182/456 - (39%)
Similarity:273/456 - (59%) Gaps:19/456 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESAL--QHERIDVYYNEASSGKYVPRAV 64
            ||.:.:..||.|.|||:..||:...||||.|:|....:..:  ..:..:.:::|..:||:|||||
Human    72 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAV 136

  Fly    65 LIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDC 129
            .:||||..:|.||.....|||.|:..:.|:..|.||:|:||||.|.|:||.||:.:||.::.|..
Human   137 FVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTG 201

  Fly   130 LQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVE 194
            ||||.:.||.|||||||..:||:.::..:|..:....||:.|:|:||..||||||:.|:.|..:|
Human   202 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 266

  Fly   195 NTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVP 259
            ::|..|.:||||:||||.|.|.:..|||.:||.|:|..:|.:|..|||.|.||.||.:...|:||
Human   267 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVP 331

  Fly   260 FPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMK 324
            :||:||.:..:||:.:.....:..|||||:|...|:..|.|..||||||:|:....::||.:..|
Human   332 YPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 396

  Fly   325 EVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPP--------RGLKMSATFIGNSTAIQEIFKRI 381
            :|:..:..:::|.:..||:|.|...||.:...||        ..::.:...:.|:||:.|.:.|:
Human   397 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARL 461

  Fly   382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDEQAEQEGY 446
            ..:|..|:.::||:|||.||||:|.||:||..:|..|..:|         :||..|....|.||.
Human   462 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY---------EEVGADSADGEDEGE 517

  Fly   447 E 447
            |
Human   518 E 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 179/451 (40%)
beta_tubulin 2..426 CDD:276956 175/433 (40%)
TUBA1CNP_001290043.1 PTZ00335 72..518 CDD:185562 181/454 (40%)
alpha_tubulin 72..505 CDD:276955 175/441 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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