DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and TUB1

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_177706.1 Gene:TUB1 / 843911 AraportID:AT1G75780 Length:447 Species:Arabidopsis thaliana


Alignment Length:449 Identity:358/449 - (79%)
Similarity:411/449 - (91%) Gaps:3/449 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESA-LQHERIDVYYNEASSGKYVPRAV 64
            ||||:|:|.|||||||||||||:|.||||:||.|.|:|:|| ||.|||:|||||||.|:||||||
plant     1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAV 65

  Fly    65 LIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDC 129
            |:|||||||||:|..|.||:|||||||:||||||||||||||||||||||:||:|:|||:|.|||
plant    66 LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 130

  Fly   130 LQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVE 194
            |||||:.||||||||||:|||||||||||||||:|.:|||.||||||||||||||||||:|||||
plant   131 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVE 195

  Fly   195 NTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVP 259
            |.||...:||||||||||||||||:|::||||||:|.||||||..||||||||:||||||||::|
plant   196 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIP 260

  Fly   260 FPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMK 324
            ||||||||.||||||::|||||.:|||.||||||:||||||.|.|||||||||.:.:|||.||.|
plant   261 FPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTK 325

  Fly   325 EVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMF 389
            |||.|:.|||:|||||||||||||||.:||||||.|:||::||:||||:|||:|:|:||||||||
plant   326 EVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEMFRRVSEQFTAMF 390

  Fly   390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDEQAEQEGYES 448
            |||||||||||||||||||||||||||||:|||||||:||||:|.|:|:|  |::.|||
plant   391 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEDEYDEE--EEQVYES 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 355/443 (80%)
beta_tubulin 2..426 CDD:276956 343/424 (81%)
TUB1NP_177706.1 PLN00220 1..431 CDD:215107 347/429 (81%)
beta_tubulin 2..427 CDD:276956 343/424 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 385 1.000 Domainoid score I157
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 798 1.000 Inparanoid score I89
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D962471at2759
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 1 1.000 - - mtm983
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.980

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