DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and TUB2

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_568959.1 Gene:TUB2 / 836390 AraportID:AT5G62690 Length:450 Species:Arabidopsis thaliana


Alignment Length:449 Identity:356/449 - (79%)
Similarity:407/449 - (90%) Gaps:2/449 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            ||||:|:|.||||||||:||||::..||||||.|.|.|:|.||.|||:|||||||.|::||||||
plant     1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVL 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :|||||||||:|..|.||.|||||||:|||||||||||||||||||||||||:|:|||:|.||||
plant    66 MDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            ||||:.||||||||||:|||||||||||||||:|.:|||.||||||||||||||||||:||||||
plant   131 QGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            .||...:|||||||||||||||::|::||||||:|.||||||.|||||||||:||||||||::||
plant   196 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            |||||||.||||||::||||||:|||.||||||:|:||||.|.|||||||||.:.:|||.||.||
plant   261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390
            ||.||.|||:|||||||||||||||..||||||.||||::|||||||:|||:|:|:|||||||||
plant   326 VDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDEQAEQEGYESE 449
            ||||||||||||||||||||||||||||:|||||||:||||:|.:::||  |:..|:.|
plant   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDE--EEGEYQQE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 354/442 (80%)
beta_tubulin 2..426 CDD:276956 343/423 (81%)
TUB2NP_568959.1 PLN00220 1..430 CDD:215107 347/428 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 385 1.000 Domainoid score I157
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 798 1.000 Inparanoid score I89
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D962471at2759
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 1 1.000 - - mtm983
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.980

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