DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and TUB4

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_199247.1 Gene:TUB4 / 834459 AraportID:AT5G44340 Length:444 Species:Arabidopsis thaliana


Alignment Length:444 Identity:353/444 - (79%)
Similarity:404/444 - (90%) Gaps:1/444 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            ||||:|:|.||||||||:||||:|.||||||..|.|.|:|.||.||||||:||||.|||||||||
plant     1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPRAVL 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :|||||||||:|..|.||:|||||||:|||||||||||||||||||||||||:|:|||:|..|||
plant    66 MDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            ||||:.||||||||||:|||||||||||||||:|.:|||.||||||||||||||||||:||||||
plant   131 QGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            .||...:|||||||||||||||::||:||||||:|.||||||.|||||||||:||||||||::||
plant   196 ADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            |||||||.||||||::|||||.||:|.||||||:||||||.|.|||||||||.:.:|||.:|.||
plant   261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKE 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390
            ||.||.|:|:|||||||||||||||.:||||.|:||||::|||||||:|||:|:|:|||||||||
plant   326 VDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDEQAEQE 444
            ||||||||||||||||||||||||||||::||||||:|||.:| |:::|:.|.|
plant   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAGEE-EYEEEEEEYE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 352/442 (80%)
beta_tubulin 2..426 CDD:276956 342/423 (81%)
TUB4NP_199247.1 PLN00220 1..431 CDD:215107 347/429 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 385 1.000 Domainoid score I157
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 798 1.000 Inparanoid score I89
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D962471at2759
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 1 1.000 - - mtm983
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X99
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.980

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