DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tubb4b

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_012825219.1 Gene:tubb4b / 779904 XenbaseID:XB-GENE-969447 Length:474 Species:Xenopus tropicalis


Alignment Length:472 Identity:391/472 - (82%)
Similarity:422/472 - (89%) Gaps:29/472 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEA----------- 54
            |||||||||||||||||:||||:|||||||||.|.|||:|.||.|||:||||||           
 Frog     1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGEWECRFCSV 65

  Fly    55 ------------------SSGKYVPRAVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNW 101
                              :.|||||||||:|||||||||||..|.||:|||||||:|||||||||
 Frog    66 GGCWSSRIPGMPYILLPFAGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 130

  Fly   102 AKGHYTEGAELIDSVLEVLRKESEGCDCLQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNS 166
            |||||||||||:||||:|:|||:|.|||||||||.||||||||||:||||||||||||||||||:
 Frog   131 AKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 195

  Fly   167 FSVVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSV 231
            ||||||||||||||||||||||:||||||||||:|||||||||||||||||::|||||||||||.
 Frog   196 FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 260

  Fly   232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDA 296
            |||||||||||||||||||||||||||||||||||||||||||::||||||||||.|||||||||
 Frog   261 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDA 325

  Fly   297 KNMMTACDPRHGRYLTVACIFRGPMSMKEVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGL 361
            ||||.|||||||||||||.:|||.|||||||.||.|||:|||||||||||||||.||||||||||
 Frog   326 KNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGL 390

  Fly   362 KMSATFIGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
            |||||||||||||||:|||||||||||||||||||||||||||||||||||||||||:|||||||
 Frog   391 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 455

  Fly   427 EATADDEVEFDDEQAEQ 443
            :|||::|.||::.:.|:
 Frog   456 DATAEEEGEFEEGEEEE 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 391/472 (83%)
beta_tubulin 2..426 CDD:276956 381/452 (84%)
tubb4bXP_012825219.1 PLN00220 1..459 CDD:215107 385/457 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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