DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub97EF and TUBG1

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_024306672.1 Gene:TUBG1 / 7283 HGNCID:12417 Length:538 Species:Homo sapiens


Alignment Length:540 Identity:159/540 - (29%)
Similarity:265/540 - (49%) Gaps:106/540 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVLI 66
            |||:.||.||||||||.:||:.:..||||.|.|.....:....:|.||::.:|....|:|||||:
Human     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLL 67

  Fly    67 DLEPGTMDSVRQSPVGQLFRPDNFVYGQ--SGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDC 129
            ||||..:.|:..||..:|:.|:|....:  .|||||||.| :::|.::.:.:.:::.:|::|.|.
Human    68 DLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDS 131

  Fly   130 LQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPS-PKVSDTVVEPYNATLSIHQLV 193
            |:||.|.||:.||||||||:.|:.::.:.||.:::.::||.|: .::||.||:|||:.|::.:|.
Human   132 LEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLT 196

  Fly   194 ENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMV 258
            :|.|....:||.||..|....|.:.:|::..:|.|||..||..||.||:||.:|.||..|..:::
Human   197 QNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLI 261

  Fly   259 PFPRLHFFMPGFAPLTA------------------------------------------------ 275
            |.|||||.|.|:.|||.                                                
Human   262 PTPRLHFLMTGYTPLTTDQSVRAAFSVPGQAGPGPNRPCPSLSLFPTAPGATLCGPQGAALRDWH 326

  Fly   276 ------------------------KG-----------SQQY-----RALTVAELTQQMFDAKNMM 300
                                    ||           |..|     |..||.::.:::...||:|
Human   327 RVGDFLADLLSTLPLPLASAKEKPKGDCALSAGRVPVSLSYQVASVRKTTVLDVMRRLLQPKNVM 391

  Fly   301 TACDPRHGR-------YLTVACIFRGPMSMKEVDTQMYNVQSKNSSYFVEWIPNNVKVAV---CD 355
            .:.    ||       |:.:..|.:|.:...:|...:..::.:..:.|:.|.|.:::||:   ..
Human   392 VST----GRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSP 452

  Fly   356 IPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
            ..|...::|...:.|.|:|..:|:|...|:..:.:|:|||..:..|.|.:..|.|.:::...:..
Human   453 YLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQ 517

  Fly   421 EYQQYQEATADDEVEFDDEQ 440
            ...:|..||..|.:.:..::
Human   518 LIDEYHAATRPDYISWGTQE 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 159/540 (29%)
beta_tubulin 2..426 CDD:276956 155/524 (30%)
TUBG1XP_024306672.1 gamma_tubulin 3..522 CDD:276957 155/523 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.