DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tubb6

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001017762.2 Gene:tubb6 / 550458 ZFINID:ZDB-GENE-070424-195 Length:447 Species:Danio rerio


Alignment Length:444 Identity:378/444 - (85%)
Similarity:415/444 - (93%) Gaps:1/444 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            ||||||:||||||||||:||||:|||||||||.|.|.|:|:||.:||:||||||||.||||||:|
Zfish     1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGSYVGDSSLQLDRINVYYNEASSHKYVPRAIL 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :|||||||||||....|||||||||::||:|||||||||||||||||:||||:::|||.|.||||
Zfish    66 VDLEPGTMDSVRSGAFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDIVRKECEYCDCL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            |||||.||||||||||:||||||||||||||||||:|||:||||||||||||||||||:||||||
Zfish   131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVEN 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            ||||:|||||||||||||||||::|||||||||||.|||||||.|||||||||||||||||||||
Zfish   196 TDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPF 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            |||||||||||||||:||||||||||.|||||||||:|||.|||||.|||||||.:|||||||||
Zfish   261 PRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMMAACDPRLGRYLTVATVFRGPMSMKE 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390
            ||.||..:|:||||||||||||||||||||||||||||::|||||||||||:||||||||:|||:
Zfish   326 VDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFK 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAD-DEVEFDDEQAEQ 443
            |||||||:||||||||||||||||||||:||||||||||.. .|..|||:..|:
Zfish   391 RKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQEATCSIGEEAFDDDDEEE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 378/444 (85%)
beta_tubulin 2..426 CDD:276956 367/423 (87%)
tubb6NP_001017762.2 PLN00220 1..429 CDD:215107 371/427 (87%)
beta_tubulin 2..426 CDD:276956 367/423 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.930

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