DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tubb6

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001008056.1 Gene:tubb6 / 493418 XenbaseID:XB-GENE-491459 Length:446 Species:Xenopus tropicalis


Alignment Length:443 Identity:382/443 - (86%)
Similarity:419/443 - (94%) Gaps:1/443 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            ||||||:||||||||||:||||:|||||||||.|.|.|:||||.|||:|||||:||.||||||:|
 Frog     1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYVPRAIL 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :|||||||||||....|:|||||||::||:|||||||||||||||||:||||:::|||.|.||||
 Frog    66 VDLEPGTMDSVRSGQFGELFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDIVRKECEHCDCL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            |||||.||||||||||:|||:||||||||||||||:|||:||||||||||||||||||:||||||
 Frog   131 QGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVEN 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            ||||:|||||||||||||||||::|||||||||||.|||||||.|||||||||||||||||||||
 Frog   196 TDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPF 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            |||||||||||||||:||||||||||.|||||||||||||.|||||||||||||.:|||||||||
 Frog   261 PRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKE 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390
            ||.||..||:||||||||||||||||||||||||||||::||||||||||||||||||||:||||
 Frog   326 VDEQMLAVQNKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQEIFKRISEQFSAMFR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADD-EVEFDDEQAE 442
            |||||||:||||||||||||||||||||:|||||||||||:| |..|::::.|
 Frog   391 RKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQEATANDGEEAFEEDEEE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 382/443 (86%)
beta_tubulin 2..426 CDD:276956 371/423 (88%)
tubb6NP_001008056.1 PLN00220 1..432 CDD:215107 378/430 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.030

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