DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tube1

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_957279.2 Gene:tube1 / 393960 ZFINID:ZDB-GENE-040426-1174 Length:470 Species:Danio rerio


Alignment Length:459 Identity:150/459 - (32%)
Similarity:243/459 - (52%) Gaps:44/459 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHG-IDPNGYYHGESALQHERIDV---YYNEASSGKYV- 60
            |.:.|.:|.||||||:|.:||::...||. ::..|.|....:.....:|.   |..||:.||.. 
Zfish     1 MTQSVVVQVGQCGNQVGCRFWDLALREHAHVNQMGVYDDALSSFFRNVDQRRGYGAEATGGKITG 65

  Fly    61 --PRAVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKE 123
              .||||:|:|.|.:..:.|.|:..||.....:...||:|||||.||:|.|....:.:::.:||.
Zfish    66 LKARAVLVDMEEGVLGGILQGPLRSLFSSAQLISDVSGSGNNWAVGHHTYGLAYREQIVDQVRKA 130

  Fly   124 SEGCDCLQGFQLAHSLGGGTGSGLGTLLISKIREEYPD--RIMNSFSVVPSPKVSDTVVEPYNAT 186
            :|.|||||.|.|.||:||||||||||.::..:.||:|:  ||:.  ||.|:.: .|.:..|||:.
Zfish   131 AEHCDCLQCFFLIHSMGGGTGSGLGTFVLKLLEEEFPEVYRIVT--SVYPTAE-DDVITSPYNSV 192

  Fly   187 LSIHQLVENTDETFCIDNEALYDICFR--------------------------TLKLSSPTYGDL 225
            |::.:|.|:.|....:||::|.||..:                          .:|:..| :..:
Zfish   193 LAMKELTEHADCVLPVDNQSLVDIVGKIKHMSNTGKPGCAIKKDSTIISGQGGVVKVEKP-FDAM 256

  Fly   226 NHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAKGSQQYRALTVAELT 290
            |::|:..:..:|:..||.|.||.||.::|:|:|||||||:.:....||............:.::.
Zfish   257 NNIVANLLLNITSSARFEGSLNMDLNEIAMNLVPFPRLHYLVSSLTPLYTLADVSVPPRRLDQMF 321

  Fly   291 QQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKEVDTQMYNVQSKNSSY-FVEWIPNNVKVAVC 354
            ...|..::.:...||:|..||..|.:.||.:.:.::   ..|::....:. ||.|.....|.::|
Zfish   322 SDAFSKEHQLIRADPKHNLYLACALMLRGNVQLSDL---RRNIERLRPTLPFVPWNQEGWKTSLC 383

  Fly   355 DIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDL 418
            .:.|.|...|...:.|:|.::..|..:.|:|..::||||.||.|.. :||::..||||.|:::.|
Zfish   384 SVLPVGHSHSLLALANNTCVKSTFSELRERFMKLYRRKAHLHHYLAVDGMEQSGFTEALSSISTL 448

  Fly   419 ISEY 422
            |.:|
Zfish   449 IEDY 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 150/459 (33%)
beta_tubulin 2..426 CDD:276956 149/458 (33%)
tube1NP_957279.2 PTZ00387 1..467 CDD:240395 150/459 (33%)
epsilon_tubulin 2..455 CDD:276959 149/458 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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