DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and alphaTub67C

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster


Alignment Length:464 Identity:180/464 - (38%)
Similarity:271/464 - (58%) Gaps:24/464 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYY--------HGESA-LQHER----IDVYYN 52
            |||:|.:|.||||.|||:..||:...||||:.:|..        .|.|| :.|:.    ...::.
  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65

  Fly    53 EASSGKYVPRAVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVL 117
            |..:||.|||::.:||||..:|.||...:.:|:.|:..:.|:..|.||:|:|.|:.|.|:||.|.
  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130

  Fly   118 EVLRKESEGCDCLQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEP 182
            ..|:|.:|.||.||||.:.||||||||||..:||:.::..:|..:....|:|.||||||..||||
  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195

  Fly   183 YNATLSIHQLVENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLN 247
            |||.|:.|..::::|..|.:||||:||||..:|.:..|.|.:||.|::..:|..|..|||.|.:|
  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260

  Fly   248 ADLRKLAVNMVPFPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLT 312
            .||.:...|:|||||:||.:..:|||.:.....:....:..||...|::.|||..||||.|:::.
  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325

  Fly   313 VACIFRGPMSMKEVDTQMYNVQSKNSSYFVEWIPNNVKVAV-----CDIPPRGL---KMSATFIG 369
            ...::||.:..|:|:..:..::||....||:|.|...|:.:     ..:|...|   ..:...:.
  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390

  Fly   370 NSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEV 434
            |:|||...|..:|.:|..||:::||:|||.||||:|.|||||..|:..|   .:.::|...|:..
  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVL---ERDFEEVGLDNAE 452

  Fly   435 EFDDEQAEQ 443
            |..||..::
  Fly   453 EGGDEDFDE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 180/464 (39%)
beta_tubulin 2..426 CDD:276956 174/444 (39%)
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 174/446 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443476
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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