DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and gammaTub37C

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster


Alignment Length:445 Identity:153/445 - (34%)
Similarity:260/445 - (58%) Gaps:20/445 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVLID 67
            ||:.||.||||||||.:||:.:..||||.|:|.....:....:|.||::.:|....|:|||||||
  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68

  Fly    68 LEPGTMDSVRQSPVGQLFRPDNFVYGQ--SGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            |||..::::..||..:|:..:|....:  .|||||||.| :::|.::.:.|.::|.:|::|.|.|
  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSL 132

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPS-PKVSDTVVEPYNATLSIHQLVE 194
            :||.|.||:.||||||:|:.::.::.|.:|.:::.::||.|: .::||.||:|||:.|::.:|.:
  Fly   133 EGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTK 197

  Fly   195 NTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVP 259
            ..|....:||.||..|....|.:.:||:..:|:|||..||..||.||:|..:|.:|..|..:::|
  Fly   198 CADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIP 262

  Fly   260 FPRLHFFMPGFAPLTA--KGSQQYRALTVAELTQQMFDAKNMM-TACDPRHGR--YLTVACIFRG 319
            .|:|||.|.|:.||.:  :.....|..||.::.:::...|||| :|...:..|  ::::..|.:|
  Fly   263 TPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQG 327

  Fly   320 PMSMKEVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGL-------KMSATFIGNSTAIQEI 377
            .:...:|...:..::.:..:.|:.|.|.:::||:    ||..       |:|...:.|.|.|..:
  Fly   328 EVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMANHTGISSL 388

  Fly   378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADD 432
            |||...|:..:.:|.|||..:..|.|.:.:.||.:...:.:....|:|:.||..|
  Fly   389 FKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQID 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 153/445 (34%)
beta_tubulin 2..426 CDD:276956 149/437 (34%)
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 153/445 (34%)
gamma_tubulin 4..436 CDD:276957 149/436 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443494
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D41194at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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