DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tuba4l

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_956089.1 Gene:tuba4l / 327377 ZFINID:ZDB-GENE-030131-5588 Length:449 Species:Danio rerio


Alignment Length:448 Identity:176/448 - (39%)
Similarity:274/448 - (61%) Gaps:9/448 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGES-ALQHERIDVYYNEASSGKYVPRAV 64
            |||.:.:..||.|.|:|:..||:...|||..|:|.....| :|.......:::|..:||||||||
Zfish     1 MRECISIHIGQAGIQMGNSCWELYCLEHGFQPDGTIVDSSRSLADSSFGTFFSETGAGKYVPRAV 65

  Fly    65 LIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDC 129
            .|||||..:|.:|.....||:.|:..:.|:..|.||:|:||||.|.|::||||:.:||.::.|..
Zfish    66 FIDLEPTVVDEIRNGHYRQLYHPEQLISGKEDAANNYARGHYTIGKEIVDSVLDRMRKMADQCTG 130

  Fly   130 LQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVE 194
            ||||.:.||.|||||||..:||:.::..:|..:....|||.|:|:||..||||||:.|:.|..:|
Zfish   131 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSILTTHTTLE 195

  Fly   195 NTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVP 259
            ::|.:|.:||||::|||.|.|.:..|:|.:||.|::..:|.:|..|||.|.||.||.:...|:||
Zfish   196 HSDCSFMVDNEAIFDICKRNLDIERPSYTNLNRLIAQIVSSITASLRFDGALNVDLTEFQTNLVP 260

  Fly   260 FPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMK 324
            :||:||.:..::|:.:.....:..|:|.|:|...|:..|.|..||||.|:|:....::||.:..|
Zfish   261 YPRIHFPLVTYSPIISAEKAYHEQLSVPEITNACFEPANQMVKCDPRRGKYMACCLLYRGDVVPK 325

  Fly   325 EVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPP--------RGLKMSATFIGNSTAIQEIFKRI 381
            :|:..:.|::::.|..||:|.|...||.:...||        ..::.:...:.|:|||.|.:.|:
Zfish   326 DVNAAIANIKTRRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGRL 390

  Fly   382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDE 439
            ..:|..|:.::||:|||.||||:|.||:||..:|..|..:|::....:.||..|.::|
Zfish   391 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVAADSTDDCGEDEEE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 176/448 (39%)
beta_tubulin 2..426 CDD:276956 171/432 (40%)
tuba4lNP_956089.1 PTZ00335 1..449 CDD:185562 176/448 (39%)
alpha_tubulin 2..434 CDD:276955 171/431 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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