DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub97EF and nda3

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_596650.1 Gene:nda3 / 2540582 PomBaseID:SPBC26H8.07c Length:448 Species:Schizosaccharomyces pombe


Alignment Length:447 Identity:330/447 - (73%)
Similarity:384/447 - (85%) Gaps:3/447 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            ||||||:||||||||:|:.||..|:||||:|..|.|||.|..||||::||:|||:.|||||||||
pombe     1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGGKYVPRAVL 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :||||||||:|:....|.||||||.:||||||||.||||||||||||.|:||:|:|:|:|.||.|
pombe    66 VDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEACDAL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            |||||.||||||||||:||||:||||||||||:|.:|||.|:||.|||||||||||||:||||||
pombe   131 QGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVEN 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            :|||||||||||..|...|||:.||:|.|||||||..|:||||..||||:||:||||||||||||
pombe   196 SDETFCIDNEALSSIFANTLKIKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPF 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            |||||||.|||||.|.||..::|::|.|||||||||.|||.|.|||||||||||.:|||.:||||
pombe   261 PRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKE 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390
            ||.|:.:||:|||:|||||||:||..|||.:||:.||||||||||||:|||||:|:.:||:||||
pombe   326 VDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPKDLKMSATFIGNSTSIQEIFRRLGDQFSAMFR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEA---TADDEVEFDDEQAEQE 444
            ||||||||||||||||||||||||||||:|||||||||   ..|::.|.::|:...|
pombe   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGIDEGDEDYEIEEEKEPLE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 329/445 (74%)
beta_tubulin 2..426 CDD:276956 321/423 (76%)
nda3NP_596650.1 beta_tubulin 2..426 CDD:276956 321/423 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 359 1.000 Domainoid score I157
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 718 1.000 Inparanoid score I93
OMA 1 1.010 - - QHG53784
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 1 1.000 - - otm47174
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
TreeFam 00.000 Not matched by this tool.
109.970

Return to query results.
Submit another query.