DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and Tubb3

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_640347.2 Gene:Tubb3 / 246118 RGDID:628595 Length:450 Species:Rattus norvegicus


Alignment Length:448 Identity:389/448 - (86%)
Similarity:419/448 - (93%) Gaps:3/448 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            ||||||:||||||||||:||||:|||||||||:|.|.|:|.||.|||.||||||||.||||||:|
  Rat     1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAIL 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :|||||||||||....|.|||||||::||||||||||||||||||||:||||:|:|||.|.||||
  Rat    66 VDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            |||||.||||||||||:|||||||:||||||||||:|||||||||||||||||||||||||||||
  Rat   131 QGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            ||||:|||||||||||||||||::|||||||||||.|||||||.|||||||||||||||||||||
  Rat   196 TDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPF 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            |||||||||||||||:||||||||||.|||||||||||||.|||||||||||||.:|||.|||||
  Rat   261 PRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKE 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390
            ||.||..:|||||||||||||||||||||||||||||||:|||||||||||:|||||||||||||
  Rat   326 VDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEF---DDEQAEQEG 445
            ||||||||||||||||||||||||||||:|||||||:|||::|.|.   |||::|.:|
  Rat   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDDEESEAQG 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 388/445 (87%)
beta_tubulin 2..426 CDD:276956 376/423 (89%)
Tubb3NP_640347.2 PLN00220 1..447 CDD:215107 388/445 (87%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..450 15/27 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X99
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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