DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and Tubal3

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001029051.2 Gene:Tubal3 / 238463 MGIID:3588215 Length:446 Species:Mus musculus


Alignment Length:441 Identity:170/441 - (38%)
Similarity:258/441 - (58%) Gaps:17/441 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYY--HGESALQHERI-------DVYYNEASS 56
            |||.:.:..||.|.|||...||:...||||.|:|:.  |....|::.::       |.:::|..:
Mouse     1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRA 65

  Fly    57 GKYVPRAVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLR 121
            ||:|||.:.:||||..:|.:|......||.|:..|.|:..|.|.:|:|.|:.|:|:|:.|||.:|
Mouse    66 GKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIR 130

  Fly   122 KESEGCDCLQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNAT 186
            |.:|.|..||||.:..|.|||||||..:||:.::..||..:|...|||.|||::|..|||||||.
Mouse   131 KLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAI 195

  Fly   187 LSIHQLVENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLR 251
            |:.|..:|.:|..|.:|||||||||...|.:..|:|..:|.|::...|.:|..|||.|.||.||.
Mouse   196 LTTHSTIEYSDCAFMVDNEALYDICQHKLGIERPSYASINRLIAQVSSSITASLRFEGPLNVDLI 260

  Fly   252 KLAVNMVPFPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACI 316
            :...|:||:||:||.:...||:.:........|:|:::|...|:..|.:..||||.|:|:....:
Mouse   261 EFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGKYMACCLL 325

  Fly   317 FRGPMSMKEVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPP--------RGLKMSATFIGNSTA 373
            :||.:..|:|:..:..::|:.|..||:|.|...||.:...||        ..::.:...:.|:||
Mouse   326 YRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTA 390

  Fly   374 IQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 424
            |.|.:.|:..:|..|:.:|||||||..|||:..||.||..::..|..:|::
Mouse   391 IVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDYEE 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 170/441 (39%)
beta_tubulin 2..426 CDD:276956 169/440 (38%)
Tubal3NP_001029051.2 PTZ00335 1..443 CDD:185562 170/441 (39%)
alpha_tubulin 2..442 CDD:276955 169/440 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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