DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tbb-6

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_506075.2 Gene:tbb-6 / 179680 WormBaseID:WBGene00006539 Length:426 Species:Caenorhabditis elegans


Alignment Length:428 Identity:243/428 - (56%)
Similarity:324/428 - (75%) Gaps:7/428 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            |:||:::|.||||||||:||||.||:|||:..:|.|.|::..|.|||..||.|....||||||:|
 Worm     1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAIL 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :||:|.:::.||.:..|:||.|:|.|.|:|||||||::|:|.:|||::|.||.|:|:|:|..|.|
 Worm    66 VDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            :||||.||||||||||||:|||||:||||.|:.:::.|::||.||||||||||||.||:..|::|
 Worm   131 EGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDN 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSS-PTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVP 259
            .||.|||||||::|||...|||.: .||||||||.|:.:||:||..||.|.|..|:|||  |...
 Worm   196 CDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAG 258

  Fly   260 FPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMK 324
            .|||||||..|||:..||....:|.::::||||:.||||:|| |:...|::|:.|.|:||..:.|
 Worm   259 SPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEK 322

  Fly   325 EVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMF 389
            :...|:.:|::::.|..:|.:|.:....|||||.||||.|||||.|||||||..||||:||..:|
 Worm   323 KDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLF 387

  Fly   390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQE 427
            ||||||||||   |:|.|||:||:.:||||||:|||::
 Worm   388 RRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYEK 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 243/428 (57%)
beta_tubulin 2..426 CDD:276956 241/424 (57%)
tbb-6NP_506075.2 PTZ00010 1..421 CDD:240228 242/425 (57%)
beta_tubulin 2..421 CDD:276956 241/424 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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