DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tba-7

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_499463.1 Gene:tba-7 / 176568 WormBaseID:WBGene00006533 Length:444 Species:Caenorhabditis elegans


Alignment Length:452 Identity:175/452 - (38%)
Similarity:279/452 - (61%) Gaps:22/452 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYY---HGESALQHERIDVYYNEASSGKYVPR 62
            |||::.:..||.|.|||:..||:...||||.|:|..   .|.|.    .:..::::...|::|||
 Worm     1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEPDGNSG----SLGTFFSDTGYGRHVPR 61

  Fly    63 AVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGC 127
            ::.:||||..:|.:|.....:||.|:..:.|:..|.||:|:||||.|.|:||:.|:.:|:.:..|
 Worm    62 SIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNC 126

  Fly   128 DCLQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQL 192
            :.||||.:.||.|||||||..::|:.::..||..:....||:.|:|::|.:||||||:.|:.|..
 Worm   127 EGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTT 191

  Fly   193 VENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNM 257
            :|::|.:|.:||||:||||.|.|::|.|||.:||.::|..:|.:|..|||.|.||.||.:...|:
 Worm   192 LEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNL 256

  Fly   258 VPFPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMS 322
            ||:||:||.:..:.||.:....::  |:|.|:|:..|:|.|.|..|||:||:|:.|..::||.:.
 Worm   257 VPYPRIHFPLVAYNPLISSAHHEF--LSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVV 319

  Fly   323 MKEVDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPP--------RGLKMSATFIGNSTAIQEIFK 379
            .|:|...:.:::::.|..||:|.|...||.:...||        ..:..:...:.|:|||.|.::
 Worm   320 PKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQ 384

  Fly   380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEV--EFDDE 439
            |:..:|..|:.::||:|||.||||:|.||:||.   .||.:..:.|:|..||.:.  ..|||
 Worm   385 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGADSDANDNGDDE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 175/452 (39%)
beta_tubulin 2..426 CDD:276956 167/434 (38%)
tba-7NP_499463.1 PTZ00335 1..443 CDD:185562 173/450 (38%)
alpha_tubulin 2..430 CDD:276955 168/436 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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