DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tba-4

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_496351.1 Gene:tba-4 / 174680 WormBaseID:WBGene00006530 Length:448 Species:Caenorhabditis elegans


Alignment Length:455 Identity:178/455 - (39%)
Similarity:276/455 - (60%) Gaps:16/455 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            |||::.:..||.|.|||:..||:...||||.|:|....|...:......::::..:|:||||::.
 Worm     1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIF 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :||||..:|.:|.....:||.|:..:.|:..|.||:|:||||.|.||||:.|:.:|:.::.|..|
 Worm    66 VDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            |||.:.||.|||||||..:||:.::..:|..:....||:.|:|:||..||||||:.|:.|..:|:
 Worm   131 QGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEH 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            :|..|.:||||:||||.|.|.:..|:|.:||.::|..:|.:|..|||.|.||.||.:...|:||:
 Worm   196 SDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPY 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            ||:||.:..:.||.:.....:.||:|.::|...|:..|.|..||||:|:|:.|..::||.:..|:
 Worm   261 PRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKD 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPP--------RGLKMSATFIGNSTAIQEIFKRIS 382
            |:|.:..:::|.|..||:|.|...||.:...||        ..:..:...:.|:|||.|.:.|:.
 Worm   326 VNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD 390

  Fly   383 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDEQAEQEGYE 447
            .:|..|:.::||:|||.||||:|.|||||.   .||.:..:.|:|..||     .:|..|::|.|
 Worm   391 YKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVGAD-----SNEGLEEDGEE 447

  Fly   448  447
             Worm   448  447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 176/450 (39%)
beta_tubulin 2..426 CDD:276956 169/431 (39%)
tba-4NP_496351.1 PTZ00335 1..446 CDD:185562 176/452 (39%)
alpha_tubulin 2..433 CDD:276955 170/433 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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