DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub97EF and AgaP_AGAP004914

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_315005.3 Gene:AgaP_AGAP004914 / 1275720 VectorBaseID:AGAP004914 Length:441 Species:Anopheles gambiae


Alignment Length:441 Identity:242/441 - (54%)
Similarity:326/441 - (73%) Gaps:1/441 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            |||||....|||||::...|||.|.|||.::..|.:.|:..|..:||:||::|:....:|||::.
Mosquito     1 MREIVVFHLGQCGNRVAENFWEYICDEHCLNTEGQFEGQHYLPLQRINVYFDESPCCNFVPRSIF 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            .||||.|::.:|.|..|.||.|::|:.|::.||||||:|::||||||:|.:.:..|:..||||||
Mosquito    66 ADLEPSTLNYLRCSRYGSLFSPESFISGKTSAGNNWARGYHTEGAELLDQIEDCTRRMVEGCDCL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            |||||.||:||||||||||||:..:::.:|.:|.|:|||:||||||:.|||||||..::..::.:
Mosquito   131 QGFQLVHSIGGGTGSGLGTLLLENLKDHFPGKITNTFSVIPSPKVSEVVVEPYNAVFALSSMIRS 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            :|||||:|||||||||..||:|..|...|||||::..|:|:|...|:|||||:|||||..||||:
Mosquito   196 SDETFCLDNEALYDICVNTLRLPVPDLDDLNHLIASAMAGITCSFRYPGQLNSDLRKLLTNMVPY 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            .|||||:||.|||.|:.|:.||..||.||..|:|...|:|.||||:.|.:||.|.||||.:|.:.
Mosquito   261 RRLHFFVPGLAPLCARDSECYRQTTVPELVYQLFSTNNLMAACDPQLGTFLTAAAIFRGRLSTRT 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390
            |:..|.:|:.||...|..:||||||.|:||:||||:||:||||.|:|:|.::|:||:.||..|||
Mosquito   326 VEEHMGSVRLKNELSFSNFIPNNVKSAICDVPPRGMKMAATFIANTTSITQLFRRITGQFGTMFR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY-QEATADDEVEFDDEQ 440
            ::|||||||||||||.||||.|..:.||:.||..| :|....|:||.|||:
Mosquito   391 QRAFLHWYTGEGMDEAEFTEMEKGLADLVEEYDSYKEEGRTKDDVEDDDEE 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 242/441 (55%)
beta_tubulin 2..426 CDD:276956 234/424 (55%)
AgaP_AGAP004914XP_315005.3 PTZ00010 1..427 CDD:240228 235/425 (55%)
beta_tubulin 2..425 CDD:276956 233/422 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D962471at2759
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.