DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub97EF and tubb1

DIOPT Version :9

Sequence 1:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_031750537.1 Gene:tubb1 / 101730558 -ID:- Length:458 Species:Xenopus tropicalis


Alignment Length:442 Identity:363/442 - (82%)
Similarity:409/442 - (92%) Gaps:0/442 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65
            ||||||||.|||||||||||||:|||||||:..|.|||:||:|.|||:||:|||.|.||||||||
 Frog     1 MREIVHLQIGQCGNQIGSKFWEVISDEHGINNQGSYHGDSAVQLERINVYFNEAHSHKYVPRAVL 65

  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130
            :|||||||||:|.|.:|.|||||:|::|.|||||||||||||||||||:||::|:|.|||.||||
 Frog    66 VDLEPGTMDSLRSSSIGPLFRPDSFIHGNSGAGNNWAKGHYTEGAELIESVMDVVRTESESCDCL 130

  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195
            |||||.||||||||||:|||||:||||||||||||:||::|||||||||||||||.||||||:||
 Frog   131 QGFQLVHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSIMPSPKVSDTVVEPYNAILSIHQLIEN 195

  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            ||||||||||||||||||||||::|||||||||||:|||||||.|||||||||||||||||||||
 Frog   196 TDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTSLRFPGQLNADLRKLAVNMVPF 260

  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325
            |||||||.|.||||::.||||:||||.|||||||||:.|||||||.||||||||.||||.||.||
 Frog   261 PRLHFFMTGCAPLTSRRSQQYKALTVPELTQQMFDARTMMTACDPHHGRYLTVAGIFRGQMSTKE 325

  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390
            ||.||.:||||||:|||||||||||||||||||||||:::|||||:|||||||:||::||:||:|
 Frog   326 VDEQMLSVQSKNSAYFVEWIPNNVKVAVCDIPPRGLKLASTFIGNNTAIQEIFRRIADQFSAMYR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDEQAE 442
            ||||||||||||||||||||||.|.:|||:||||||||||:.|..|::|:.|
 Frog   391 RKAFLHWYTGEGMDEMEFTEAECNTHDLIAEYQQYQEATAEMEEYFEEEEEE 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 363/442 (82%)
beta_tubulin 2..426 CDD:276956 352/423 (83%)
tubb1XP_031750537.1 PLN00220 1..430 CDD:215107 357/428 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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