DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4849 and bipA

DIOPT Version :10

Sequence 1:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster
Sequence 2:YP_026274.1 Gene:bipA / 948369 ECOCYCID:EG11837 Length:607 Species:Escherichia coli


Alignment Length:671 Identity:145/671 - (21%)
Similarity:241/671 - (35%) Gaps:239/671 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 IRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCSIKATPVTLVLQDV 195
            :||:|::.|:.|||||.||.|::|: ..|::..|.|.|..|:...|:|||.:|.|....     :
E. coli     5 LRNIAIIAHVDHGKTTLVDKLLQQS-GTFDSRAETQERVMDSNDLEKERGITILAKNTA-----I 63

  Fly   196 KQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQAITVCIN 260
            |...|.:||.|||||.:|..|....|.|.|.|:|.:||.:|.|..|..:.|.|........|.||
E. coli    64 KWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128

  Fly   261 KIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGAPDDNLLVSPILGNVCFASSLYGFCFTLKS 325
            |:||       |..    :...:|::|..|.....|.|:.|                       .
E. coli   129 KVDR-------PGA----RPDWVVDQVFDLFVNLDATDEQL-----------------------D 159

  Fly   326 FAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFVEFILEPMYKLIAQVVGD 390
            |..:||....|:|.||                                                 
E. coli   160 FPIVYASALNGIAGLD------------------------------------------------- 175

  Fly   391 VDTTLSDTLAELNVRVSKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHI 455
                             .|:|..::.||.:.:               |:|:.:|        |..
E. coli   176 -----------------HEDMAEDMTPLYQAI---------------VDHVPAP--------DVD 200

  Fly   456 YTGPKEGDIYRDMISCNQY-GTLMVHSSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTL 519
            ..||.:..|  ..:..|.| |.:.:                 .||..|.:...|:|.:      :
E. coli   201 LDGPFQMQI--SQLDYNSYVGVIGI-----------------GRIKRGKVKPNQQVTI------I 240

  Fly   520 QDEEDSRILQVGRLWVFESRYKVELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLK 584
            ..|..:|..:||::.......::|.:...||:.|.|.|:.:..: :.|:.|..            
E. coli   241 DSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNI-SDTVCDTQ------------ 292

  Fly   585 FNTQSIIKIAV-EP-------VNPSEL----------PKMLDGLRK--VNKSYPLLSTRVEESGE 629
             |.:::..::| ||       ||.|..          .::||.|.|  |:.    ::.||||:.:
E. coli   293 -NVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHN----VALRVEETED 352

  Fly   630 ---HVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKITMI 691
               ..:.|.|||:|..::.::|:  ...::.|:.|.|             .|.|...:|      
E. coli   353 ADAFRVSGRGELHLSVLIENMRR--EGFELAVSRPKV-------------IFREIDGRK------ 396

  Fly   692 SEPLEKGLAEDIE---NGTVCINWNKKRIGEFFQVNYDWD-------LLAARSIWAFGPD----S 742
            .||.| .:..|:|   .|:|.....::: |:...:|.|..       ::.:|.:..|..:    :
E. coli   397 QEPYE-NVTLDVEEQHQGSVMQALGERK-GDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMT 459

  Fly   743 TGPNIL------VDDTLPSEV 757
            :|..:|      .||..|.||
E. coli   460 SGTGLLYSTFSHYDDVRPGEV 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4849NP_651605.1 EFTUD2 4..111 CDD:464968
PRK13351 115..957 CDD:481252 145/671 (22%)
bipAYP_026274.1 TypA 1..605 CDD:440830 145/671 (22%)
Blue background indicates that the domain is not in the aligned region.

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