DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4849 and AT5G25230

DIOPT Version :9

Sequence 1:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001318643.1 Gene:AT5G25230 / 832594 AraportID:AT5G25230 Length:973 Species:Arabidopsis thaliana


Alignment Length:984 Identity:580/984 - (58%)
Similarity:739/984 - (75%) Gaps:37/984 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSDLYDEFGNYIGPDLDSDEEDEQSIYGQPDVQDDPEDAMDEDEVEP----------QEDEDKE 55
            ||..||.|.||||||:::||.:.:.|:             .|||..||          .|:::  
plant     1 MDGSLYGECGNYIGPEIESDRDSDDSV-------------EDEDLQEPGGSNGWITTINENQN-- 50

  Fly    56 VTAVVLHEDKRYYPSAVEVYGPDVETIVQEEDAQPLDKPLIEPVKKLKFQIKEQDMQETTY-DME 119
               :||.|||:|||.|.||||.||||:|.:||.|.|::|:|:||:.::|::.....|.||| ...
plant    51 ---IVLPEDKKYYPIAKEVYGEDVETLVMDEDEQSLEQPIIKPVRDIRFEVGVIKDQTTTYVSTL 112

  Fly   120 FMADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTH--PQFETMEERQLRYTDTLFTEQERGCS 182
            |:..||..|.|:|||||||||.||||.|:|.|:.|||  ..|....::.:|||||...||||..|
plant   113 FLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNIS 177

  Fly   183 IKATPVTLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKH 247
            |||.|::|||:|.:.||||.||.||||:||||||.||::|::||.|..:|||:|||:||||.::|
plant   178 IKAVPMSLVLEDSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRH 242

  Fly   248 AVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGAPDDNL-LVSPILGNVC 311
            |:|:...|.|.|||:||||.||||||:|||:||::.:|.:|..:|.......:| |:.|..||||
plant   243 AIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVINNHISAASTNAADLPLIDPAAGNVC 307

  Fly   312 FASSLYGFCFTLKSFAKLYADTYEGVAYLD---FAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFV 373
            |||...|:.|||:|||::||..: ||| :|   ||.|||||:|::..||.|:...|....:|:||
plant   308 FASGTAGWSFTLQSFARMYAKLH-GVA-MDVDKFASRLWGDVYYHPDTRVFNTSPPVGGGERAFV 370

  Fly   374 EFILEPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCV 438
            :|||||:||:.:||:|:...::..|||||.|.:|....|.|:||||||.|:...|..|||.||.|
plant   371 QFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSNSAYKLNVRPLLRLACSSVFGSASGFTDMLV 435

  Fly   439 EHIKSPLENAKRKVDHIYTGPKEGDIYRDMISCNQYGTLMVHSSKMYPNDDCTFFQVLARIVSGT 503
            :||.||.|.|.|||||.|||.|:..||..|:.|:..|.|||:.:|:||..|.:.|.|..|:.||.
plant   436 KHIPSPREAAARKVDHSYTGTKDSPIYESMVECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGR 500

  Fly   504 LHAGQEVRVLGENYTLQDEEDSRILQVGRLWVFESRYKVELNRVPAGNWVLIEGIDQCIVKTSTI 568
            |..||.||||||.|:.:||||..|.:|.:||::::||::.::..|.|:||||||:|..|:||:|:
plant   501 LQTGQSVRVLGEGYSPEDEEDMTIKEVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATL 565

  Fly   569 VDINVPEDLYIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVIL 633
            .:.:..||:||||.|||||..::|.|.||:||||||||::||||::|||||..|:|||||||.||
plant   566 CNASYDEDVYIFRALKFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTIL 630

  Fly   634 GTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKG 698
            ||||||||.::.|||::|||:.:|||||||:|||||||:||:||||||||||||:|||:|||::|
plant   631 GTGELYLDSIIKDLRELYSEVQVKVADPVVSFCETVVESSSMKCFAETPNKKNKLTMIAEPLDRG 695

  Fly   699 LAEDIENGTVCINWNKKRIGEFFQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLT 763
            ||||||||.|.|:||:.::|:||:..|||||||||||||||||..|.|||:|||||:|||:||:.
plant   696 LAEDIENGVVSIDWNRVQLGDFFRTKYDWDLLAARSIWAFGPDKQGTNILLDDTLPTEVDRNLMM 760

  Fly   764 AVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATP 828
            .||||||||||||.||||||:||||||||||:|..||.|.||||.||:|||||||||||||||||
plant   761 GVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATP 825

  Fly   829 RLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTH 893
            |||||..:||:|.|.|||:|:||||:||||:||.|.|..|:|.|.:|||:|.|:|||||||||.|
plant   826 RLMEPVYYVEIQTPIDCVTAIYTVLSRRRGYVTSDVPQPGTPAYIVKAFLPVIESFGFETDLRYH 890

  Fly   894 TQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDD 958
            |||||||||||.||.|||||||||:|.:|||||....|||||||:|||||||:|||||.|||||:
plant   891 TQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSGNKFFDE 955

  Fly   959 PMLLELARQ 967
            .|::|||:|
plant   956 AMMVELAQQ 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4849NP_651605.1 EFTUD2 4..111 CDD:292623 45/116 (39%)
PTZ00416 115..957 CDD:240409 524/848 (62%)
Snu114p 132..340 CDD:206730 118/210 (56%)
Translation_Factor_II_like 477..568 CDD:295476 44/90 (49%)
snRNP_III 589..660 CDD:293921 47/70 (67%)
EF2_IV_snRNP 660..837 CDD:238840 138/176 (78%)
eEF2_C_snRNP 832..911 CDD:239765 54/78 (69%)
AT5G25230NP_001318643.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 273 1.000 Domainoid score I428
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3133
Inparanoid 1 1.050 1220 1.000 Inparanoid score I19
OMA 1 1.010 - - QHG54470
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 1 1.000 - - FOG0004923
OrthoInspector 1 1.000 - - otm3374
orthoMCL 1 0.900 - - OOG6_100212
Panther 1 1.100 - - O PTHR42908
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2958
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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