DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4849 and EFL1

DIOPT Version :9

Sequence 1:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001309774.1 Gene:EFL1 / 79631 HGNCID:25789 Length:1120 Species:Homo sapiens


Alignment Length:1105 Identity:277/1105 - (25%)
Similarity:459/1105 - (41%) Gaps:286/1105 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 MEFMADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCS 182
            ::.|..|......|||:.::.|:.|||||..|||| .::....:....:|||.|:...||.||.:
Human     6 LDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLI-SSNGIISSRLAGKLRYMDSREDEQIRGIT 69

  Fly   183 IKATPVTLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKH 247
            :|::.::|... ...:.||:|:.|:||||:||.|.:.|:|:.||.::.:||.|||...|:.:|:.
Human    70 MKSSAISLHYA-TGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQ 133

  Fly   248 AVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTY------------------ 294
            |..|.....:.||||||||:|||..||:||..||:|:|::|.|..|.                  
Human   134 AWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTLFTSKVLEERAERETESQV 198

  Fly   295 ------------------GAPDDNLLVSPILGNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLD 341
                              ...|.:|..||..|||.|.|::.|:.|.::.||::|:... |:....
Human   199 NPNSEQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKI-GIKKEV 262

  Fly   342 FAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFVEFILEPMYKLIAQVVGDVDTTLSDTLAELNVRV 406
            ..|.||||.|.|.|.:|..|.......:..||:.|||.::.|...|:......:...:..|.:::
Human   263 LMKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIWSLYDAVLKKDKDKIDKIVTSLGLKI 327

  Fly   407 -SKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHIY-TG--------PKE 461
             ::|...|:.:..:..:|::::......:.|..:.:.|||:....:|:.:. ||        |:.
Human   328 GAREARHSDPKVQINAICSQWLPISHAVLAMVCQKLPSPLDITAERVERLMCTGSQTFDSFPPET 392

  Fly   462 GDIYRDMISCNQYGT--LMVHSSKMY--------------------------------------- 485
            ..:....:.|....|  :::..|||:                                       
Human   393 QALKAAFMKCGSEDTAPVIIFVSKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQ 457

  Fly   486 ------PNDD------C----------------------------TFFQVLARIVSGTLHAGQEV 510
                  |..|      |                            ..|...||:.||....|:::
Human   458 GQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQEENNQESFIAFARVFSGVARRGKKI 522

  Fly   511 RVLGENYTLQDEEDSRILQVG--------------------RLWVFESRYKVELNRVPAGNWVLI 555
            .|||..|:  ..|..|.:.:|                    .|::...|....|..||.||.:.|
Human   523 FVLGPKYS--PLEFLRRVPLGFSAPPDGLPQVPHMAYCALENLYLLMGRELEYLEEVPPGNVLGI 585

  Fly   556 EGIDQCIVKTSTIVDI-NVPEDLYIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPL 619
            .|:...::|::|:..: :.|.    |.||.|....|:::||||.:|||:|:::.|::.:|::.|.
Human   586 GGLQDFVLKSATLCSLPSCPP----FIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPC 646

  Fly   620 LSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNK 684
            :...::|:||||::..||::|...:.||::.:::|.|.|::|::.|.||:.:...:....|...|
Human   647 VQILIQETGEHVLVTAGEVHLQRCLDDLKERFAKIHISVSEPIIPFRETITKPPKVDMVNEEIGK 711

  Fly   685 KNKITMISEPLE------KGLAEDIENGTVCINWNKK-------------RIGEFFQVNYD---- 726
            :.|:.:|.:..|      :|:..| .:|.:.|....|             .:.:..:.|.|    
Human   712 QQKVAVIHQMKEDQSKIPEGIQVD-SDGLITITTPNKLATLSVRAMPLPEEVTQILEENSDLIRS 775

  Fly   727 -------------------------WDL-------LAAR-------SIWAFGPDSTGPNILVDD- 751
                                     |:.       |..|       .||:|||...||||||:. 
Human   776 MEQLTSSLNEGENTHMIHQKTQEKIWEFKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKS 840

  Fly   752 --------TLPSEVDKNLLTAVKD---SIVQGFQWGTREGPLCEEPIRNVKF------------- 792
                    |.|::......:..:|   |||.|||..|..||:||||:..|.|             
Human   841 EDFQNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLSKFEEQ 905

  Fly   793 -------------KILDGVIANEALHRG------------------------GGQIIPTARRVAY 820
                         :...|...|:.|..|                        .||:|.|.:....
Human   906 GASDLAKEGQEENETCSGGNENQELQDGCSEAFEKRTSQKGESPLTDCYGPFSGQLIATMKEACR 970

  Fly   821 SAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFG 885
            .|..:...|||......::.|..|.:..||.||::|.|.|.|:....|:.::.|||.:|..:|||
Human   971 YALQVKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFG 1035

  Fly   886 FETDLRTHTQGQAFCLSVFHHWQIVPGDPL----DKSIIIRPLEPQQASHLAREFMIKTRRRKGL 946
            |..::|..|.|.|....||.||:|:|.||.    .:...:...|...:.:.||::|...|:||||
Human  1036 FADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGL 1100

  Fly   947  946
            Human  1101  1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4849NP_651605.1 EFTUD2 4..111 CDD:292623
PTZ00416 115..957 CDD:240409 277/1105 (25%)
Snu114p 132..340 CDD:206730 83/243 (34%)
Translation_Factor_II_like 477..568 CDD:295476 29/189 (15%)
snRNP_III 589..660 CDD:293921 25/70 (36%)
EF2_IV_snRNP 660..837 CDD:238840 60/300 (20%)
eEF2_C_snRNP 832..911 CDD:239765 28/78 (36%)
EFL1NP_001309774.1 FusA 1..1103 CDD:357662 277/1105 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 430..496 3/65 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 907..930 2/22 (9%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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