Protein Alignment CG4849 and mEFTu1

DIOPT Version :9

• Sequence 1: NP_651605.1
• Gene: CG4849 / 43358
• FlyBaseID: FBgn0039566
• Length: 975
• Species: Drosophila melanogaster
• Sequence 2: NP_001163144.1
• Gene: mEFTu1 / 44438
• FlyBaseID: FBgn0024556
• Length: 489
• Species: Drosophila melanogaster
• Alignment Length: 468
• Identity: 102/468 - (21%)
• Similarity: 168/468 - (35%)
• Gaps: 120/468 - (25%)

  Fly   133 NVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCSIKATPVTLVLQDVKQ 197
            ||..:||:.||||| :...|.:.....:..|.::....|....|:.||.:|.   |..|....:.
  Fly    84 NVGTIGHVDHGKTT-LTAAITKVLADKQLAESKKYNEIDNAPEEKARGITIN---VAHVEYQTET 144

  Fly   198 KSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQA----ITVC 258
            :.|  ...|.|||.::...........||.:|.:.|.:|.|..|.   :|.:..:|.    |.|.
  Fly   145 RHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMPQTR---EHMLLAKQIGIDHIVVF 204

  Fly   259 INKIDRLILELKLPPQDAYFKLKHIVE-EVNGLLSTYGAPDDNLLV------------SPILGNV 310
            |||:|.           |..::..:|| |:..||:..|...|.:.|            ||.:|.
  Fly   205 INKVDA-----------ADEEMVDLVEMEIRELLTEMGYDGDKIPVVKGSALCALEDKSPEIGK- 257

  Fly   311 CFASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFVEF 375
                         ::..||..:.               |.:..:..|:..|            .|
  Fly   258 -------------EAILKLLQEV---------------DSFIPTPVRELDK------------PF 282

  Fly   376 IL--EPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCV 438
            :|  |.:|.:..:  |.|.|      ..|...|.|:.|:.......:::.:...|         |
  Fly   283 LLPVENVYSIPGR--GTVVT------GRLERGVVKKGMECEFVGYNKVLKSTVTG---------V 330

  Fly   439 EHIKSPLENAKR--KVDHIYTGPKEGDIYRDMISC--NQYGTLMVHSSKMY--PNDD-------C 490
            |.....||.|:.  ::..:..|.|..||.|.|:.|  .....|....:::|  ..|:       .
  Fly   331 EMFHQILEEAQAGDQLGALVRGVKRDDIKRGMVMCKPGSVKALDQLEAQVYILSKDEGGRTKPFM 395

  Fly   491 TFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVFESRYKVELNRVPAGNWVLI 555
            :|.|:  ::.|.|.....:|::..:...:..|:...||::.|..|.|...:..|.   .||..|.
  Fly   396 SFIQL--QMFSRTWDCAVQVQIPDKEMVMPGEDTKLILRLIRPMVLEQGQRFTLR---DGNLTLG 455

  Fly   556 EGIDQCIVKTSTI 568
            .|     |.|||:
  Fly   456 TG-----VVTSTL 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4849	NP_651605.1	EFTUD2	4..111	CDD:292623
		PTZ00416	115..957	CDD:240409	102/468 (22%)
		Snu114p	132..340	CDD:206730	52/223 (23%)
		Translation_Factor_II_like	477..568	CDD:295476	22/99 (22%)
		snRNP_III	589..660	CDD:293921
		EF2_IV_snRNP	660..837	CDD:238840
		eEF2_C_snRNP	832..911	CDD:239765
mEFTu1	NP_001163144.1	PRK00049	73..463	CDD:234596	101/466 (22%)
		EF_Tu	81..274	CDD:206671	53/238 (22%)
		EFTU_II	282..368	CDD:293898	24/102 (24%)
		mtEFTU_III	371..462	CDD:294005	21/100 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464540
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930