DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4849 and eftud2

DIOPT Version :9

Sequence 1:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_956802.2 Gene:eftud2 / 393480 ZFINID:ZDB-GENE-040426-1569 Length:973 Species:Danio rerio


Alignment Length:975 Identity:726/975 - (74%)
Similarity:837/975 - (85%) Gaps:2/975 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSDLYDEFGNYIGPDLDSDEEDEQSIYGQPDVQDDPEDAMDEDEVEPQEDEDKEVTAVVLHEDK 65
            |::||||||||||||:|||||::|.....: |..:..|:..|:|:.|..||.......|||||||
Zfish     1 METDLYDEFGNYIGPELDSDEDEELDAEDR-DADEADEEGDDDDQAEADEDGGGGGMEVVLHEDK 64

  Fly    66 RYYPSAVEVYGPDVETIVQEEDAQPLDKPLIEPVKKLKFQIKEQDMQETTYDMEFMADLMDTPPL 130
            :|||:|.|||||:|||||||||.|||.:|:|:||:..:|.:.||::..|.|||||:|||||:..|
Zfish    65 KYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVRMKQFTLMEQELPATVYDMEFLADLMDSSEL 129

  Fly   131 IRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCSIKATPVTLVLQDV 195
            ||||.|.||||||||.||||||.||||:....::..|||||.||||||||..||:||||:||.|.
Zfish   130 IRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDEDLRYTDILFTEQERGVGIKSTPVTMVLPDS 194

  Fly   196 KQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQAITVCIN 260
            :.||||.||.|||||||||||.|:|:|:|||:|||||||||||||||||:|||||||.|||:|||
Zfish   195 RGKSYLFNIMDTPGHVNFSDEVTSAVRLSDGIVLFIDAAEGVMLNTERLIKHAVQERLAITICIN 259

  Fly   261 KIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGAPDDNLLVSPILGNVCFASSLYGFCFTLKS 325
            ||||||:||||||.|||:||:|||:||||||||| :.|::|:|||:|||||||||.|..||||.|
Zfish   260 KIDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTY-STDESLIVSPLLGNVCFASSQYCICFTLGS 323

  Fly   326 FAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFVEFILEPMYKLIAQVVGD 390
            |||:|:|||..::|::||||||||:|||.|||||:||.|::::|||||||:|||:||:::|||||
Zfish   324 FAKIYSDTYGDISYMEFAKRLWGDIYFNPKTRKFTKKAPNSNSQRSFVEFVLEPLYKILSQVVGD 388

  Fly   391 VDTTLSDTLAELNVRVSKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHI 455
            |||:|...|.||.:.::|||:|.||:||||||||||.|:.:|.|||||:||.||...|:.|::|.
Zfish   389 VDTSLPRVLDELGIHLTKEELKLNIKPLLRLVCNRFFGEFTGLVDMCVQHIPSPQGGARAKIEHT 453

  Fly   456 YTGPKEGDIYRDMISCNQYGTLMVHSSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTLQ 520
            |||..:.|:...|..|:..|.||.|::|||..||...|....|::||||.|||.|:||||||:|:
Zfish   454 YTGGLDSDLGETMSECDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTLQAGQPVKVLGENYSLE 518

  Fly   521 DEEDSRILQVGRLWVFESRYKVELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLKF 585
            |||||:|..|||||:..:||::|:|||||||||||||.||.||||:||.:....|:..|||||||
Zfish   519 DEEDSQICTVGRLWISVARYQIEVNRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKF 583

  Fly   586 NTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKM 650
            ||.|:||||||||||||||||||||||||||||.|:|:|||||||||||.|||||||||||||||
Zfish   584 NTASVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGIGELYLDCVMHDLRKM 648

  Fly   651 YSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKK 715
            |||||||||||||.|||||||||||||||||||||||||||:|||||||||||||..|.|.||:|
Zfish   649 YSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRK 713

  Fly   716 RIGEFFQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREG 780
            ::|||||..|||||||||||||||||:|||||||||||||||||.||.:||||||||||||||||
Zfish   714 KLGEFFQTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREG 778

  Fly   781 PLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADC 845
            |||:||||||||||||.|||.|.|||||||:|||||||.|||||||||||||||.||||||||||
Zfish   779 PLCDEPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADC 843

  Fly   846 VSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIV 910
            ||||||||||||||||||||:.|||:||||||||||||||||||||||||||||.||||||||||
Zfish   844 VSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVFHHWQIV 908

  Fly   911 PGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPMLLELARQDVLINYPL 975
            |||||||||:|||||||.|.||||||||||||||||||||||:||||||||||||:|||::|||:
Zfish   909 PGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVMLNYPM 973

  Fly   976  975
            Zfish   974  973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4849NP_651605.1 EFTUD2 4..111 CDD:292623 60/106 (57%)
PTZ00416 115..957 CDD:240409 648/841 (77%)
Snu114p 132..340 CDD:206730 153/207 (74%)
Translation_Factor_II_like 477..568 CDD:295476 58/90 (64%)
snRNP_III 589..660 CDD:293921 65/70 (93%)
EF2_IV_snRNP 660..837 CDD:238840 154/176 (88%)
eEF2_C_snRNP 832..911 CDD:239765 73/78 (94%)
eftud2NP_956802.2 EFTUD2 4..111 CDD:292623 60/107 (56%)
PTZ00416 123..955 CDD:240409 641/832 (77%)
Snu114p 131..329 CDD:206730 149/198 (75%)
EF2_II_snRNP 475..568 CDD:293907 60/92 (65%)
snRNP_III 587..658 CDD:293921 65/70 (93%)
EF2_IV_snRNP 658..835 CDD:238840 154/176 (88%)
eEF2_C_snRNP 830..909 CDD:239765 73/78 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583969
Domainoid 1 1.000 373 1.000 Domainoid score I843
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3133
Inparanoid 1 1.050 1487 1.000 Inparanoid score I104
OMA 1 1.010 - - QHG54470
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 1 1.000 - - FOG0004923
OrthoInspector 1 1.000 - - oto40461
orthoMCL 1 0.900 - - OOG6_100212
Panther 1 1.100 - - LDO PTHR42908
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3947
SonicParanoid 1 1.000 - - X2958
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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